RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 CCDC32Q9BV29 185 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 LRRN3Q9H3W5 708 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 RMI1Q9H9A7 625 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MRPL15Q9P015 296 aaKnown RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 NFKBIL1Q9UBC1 381 aaPredicted RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 TBC1D29Q9UFV1 150 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MRPS2Q9Y399 296 aaKnown RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 WDR45Q9Y484 360 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ASB4Q9Y574 426 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 LINC01553A4QN01 128 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 GABRPO00591 440 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ACP2P11117 423 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 NOS3P29474 1203 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MEDAGQ5VYS4 303 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 C1orf94Q6P1W5 598 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ENPP7Q6UWV6 458 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 DNAJC5GQ8N7S2 189 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 TMIEQ8NEW7 156 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 RIPOR3Q96MK2 946 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 FRMD6Q96NE9 622 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 FAM83CQ9BQN1 747 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 TESQ9UGI8 421 aaKnown RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 GSTK1Q9Y2Q3 226 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 POLR1CO15160 346 aaPredicted RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 LANCL1O43813 399 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 PIPP12273 146 aaPredicted RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 PAICSP22234 425 aaKnown RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 DDX6P26196 483 aaKnown RBP eCLIP13.19□□□□□ -0.3
INO80E-203ENST00000540562 SHC1P29353 583 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MPIP34949 423 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 MAGEB1P43366 347 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 SMIM11AP58511 58 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 PRR5P85299 388 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 DPTQ07507 201 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 DUSP5Q16690 384 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 GDF7Q7Z4P5 450 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 NR2C2APQ86WQ0 139 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 RAB42Q8N4Z0 105 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ASCC1Q8N9N2 400 aaKnown RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 SLC41A3Q96GZ6 507 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 COX14Q96I36 57 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 LINC00615Q96LM1 132 aaPredicted RBP13.19□□□□□ -0.3
INO80E-203ENST00000540562 ZFP3Q96NJ6 502 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 PTCHD1Q96NR3 888 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ASB16Q96NS5 453 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 C11orf49Q9H6J7 331 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 WASH6PQ9NQA3 447 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 ZSCAN32Q9NX65 697 aa13.19□□□□□ -0.3
INO80E-203ENST00000540562 COL4A3Q01955 1670 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 A0A075B6Q4 140 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 LOC105369274A0A096LPK9 316 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 A0A1W2PRG6 482 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 FAM171A2A8MVW0 826 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 GNRH1P01148 92 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 CPEP16870 476 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 SRP54P61011 504 aaKnown RBP13.18□□□□□ -0.3
INO80E-203ENST00000540562 PPP2CBP62714 309 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 PPP2CAP67775 309 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 CDK5Q00535 292 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 PDGFRLQ15198 375 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 WDR88Q6ZMY6 472 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 OR4N4Q8N0Y3 316 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 RFLNBQ8N5W9 214 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 YIPF7Q8N8F6 280 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 OR13C2Q8NGS9 318 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 GPR174Q9BXC1 333 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 CDCP1Q9H5V8 836 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 PELI2Q9HAT8 420 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 MCUBQ9NWR8 336 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 EXTL2Q9UBQ6 330 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 A3GALT2U3KPV4 340 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 J3QLW9 94 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 RASGRP1O95267 797 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 ZNF19P17023 458 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 GDI1P31150 447 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 ACTR1BP42025 376 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 ACTR1AP61163 376 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 PCDH1Q08174 1060 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 HYAL4Q2M3T9 481 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 C1QTNF12Q5T7M4 302 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 BEST4Q8NFU0 473 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 WFIKKN2Q8TEU8 576 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 RASSF5Q8WWW0 418 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 IFT27Q9BW83 186 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 ALG5Q9Y673 324 aa13.18□□□□□ -0.3
INO80E-203ENST00000540562 A8MVJ9 347 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 IMPA2O14732 288 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 P2RX6O15547 441 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 CPMP14384 443 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 NT5EP21589 574 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 ETV6P41212 452 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 KRR1Q13601 381 aaKnown RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 ELOAQ14241 798 aaKnown RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 TRAM2Q15035 370 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 OCLNQ16625 522 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 PLK5Q496M5 336 aa13.17□□□□□ -0.3
INO80E-203ENST00000540562 GLYR1Q49A26 553 aaPredicted RBP13.17□□□□□ -0.3
INO80E-203ENST00000540562 KLHL22Q53GT1 634 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms