RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 ZNF655Q8N720 491 aaPredicted RBP18.97■□□□□ 0.63
TMEM260-203ENST00000539559 SUN3Q8TAQ9 357 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 DOK4Q8TEW6 326 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 RFT1Q96AA3 541 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 CNRIP1Q96F85 164 aaPredicted RBP18.97■□□□□ 0.63
TMEM260-203ENST00000539559 HCAR1Q9BXC0 346 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 TTTY10Q9BZA0 68 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 ZCCHC2Q9C0B9 1178 aaKnown RBP18.97■□□□□ 0.63
TMEM260-203ENST00000539559 EPHX3Q9H6B9 360 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 ACSS1Q9NUB1 689 aaPredicted RBP18.97■□□□□ 0.63
TMEM260-203ENST00000539559 SLC13A4Q9UKG4 626 aa18.97■□□□□ 0.63
TMEM260-203ENST00000539559 IRGMA1A4Y4 181 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 HYAL3O43820 417 aaPredicted RBP18.96■□□□□ 0.63
TMEM260-203ENST00000539559 REM1O75628 298 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 PKLRP30613 574 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 ATP12AP54707 1039 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 TAS2R38P59533 333 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 SRP54P61011 504 aaKnown RBP18.96■□□□□ 0.63
TMEM260-203ENST00000539559 TRAM2Q15035 370 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 POU4F3Q15319 338 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 ARHGAP15Q53QZ3 475 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 ZBTB37Q5TC79 503 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 NATD1Q8N6N6 113 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 DIO2Q92813 273 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 BTBD1Q9H0C5 482 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 C6orf106Q9H6K1 298 aaPredicted RBP18.96■□□□□ 0.63
TMEM260-203ENST00000539559 ZFP64Q9NPA5 681 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 ATG4BQ9Y4P1 393 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 A0A1W2PPK0 400 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 MRPL3P09001 348 aaKnown RBP18.96■□□□□ 0.63
TMEM260-203ENST00000539559 CD3GP09693 182 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 NTRK2Q16620 822 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 TCEAL5Q5H9L2 206 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 FAM46CQ5VWP2 391 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 SYT9Q86SS6 491 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 C12orf40Q86WS4 652 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 DCUN1D3Q8IWE4 304 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 PIGXQ8TBF5 258 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 HERVK_113Q902F9 699 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 KAT2AQ92830 837 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 PPP1R16AQ96I34 528 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 ENKD1Q9H0I2 346 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.96■□□□□ 0.63
TMEM260-203ENST00000539559 KLHL1Q9NR64 748 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 SLCO1C1Q9NYB5 712 aa18.96■□□□□ 0.63
TMEM260-203ENST00000539559 MRPS7Q9Y2R9 242 aaKnown RBP18.96■□□□□ 0.63
TMEM260-203ENST00000539559 RFPL3O75679 317 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 ZIC2O95409 532 aaPredicted RBP18.95■□□□□ 0.62
TMEM260-203ENST00000539559 PGGHGQ32M88 737 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 C9orf64Q5T6V5 341 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 FCRLBQ6BAA4 426 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 RPTNQ6XPR3 784 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 SFTPA1Q8IWL2 248 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 NRSN1Q8IZ57 195 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 LINC01555Q8NAE3 123 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 RFKQ969G6 155 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 DACT3Q96B18 629 aaPredicted RBP18.95■□□□□ 0.62
TMEM260-203ENST00000539559 ZSWIM3Q96MP5 696 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 LGR4Q9BXB1 951 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 SLC38A1Q9H2H9 487 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 DPEP2Q9H4A9 486 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 H2AFY2Q9P0M6 372 aaPredicted RBP18.95■□□□□ 0.62
TMEM260-203ENST00000539559 ADAM30Q9UKF2 790 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 RWDD3Q9Y3V2 267 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 A0A1W2PPV9 198 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 TBX19O60806 448 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 MC3RP41968 323 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 SLC16A1P53985 500 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 PER3P56645 1201 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 SLC3A1Q07837 685 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 LTB4RQ15722 352 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 SLC25A35Q3KQZ1 300 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 ESPNLQ6ZVH7 1005 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 LINC00471Q8N535 108 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 LRRC17Q8N6Y2 441 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 OR7D2Q96RA2 312 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 TIMP4Q99727 224 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 SPATA5L1Q9BVQ7 753 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 PINK1Q9BXM7 581 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 OSGEPL1Q9H4B0 414 aa18.95■□□□□ 0.62
TMEM260-203ENST00000539559 A0A0A6YYD5 115 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.94■□□□□ 0.62
TMEM260-203ENST00000539559 A0A1W2PR48 441 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CACNB4O00305 520 aaPredicted RBP18.94■□□□□ 0.62
TMEM260-203ENST00000539559 SLC19A2O60779 497 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 RHOP08100 348 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 ZNF250P15622 560 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 NTSP30990 170 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 REEP5Q00765 189 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 E2F1Q01094 437 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 RIN1Q13671 783 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 KLHL12Q53G59 568 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 ZNF697Q5TEC3 545 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 PLEKHM3Q6ZWE6 761 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 UBE2Q1Q7Z7E8 422 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 OR5M3Q8NGP4 307 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 OR13C5Q8NGS8 318 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 OMA1Q96E52 524 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 BCL2L10Q9HD36 194 aa18.94■□□□□ 0.62
TMEM260-203ENST00000539559 CYSLTR2Q9NS75 346 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms