RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 THOC1Q96FV9 657 aaKnown RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 CHMP6Q96FZ7 201 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 CERS2Q96G23 380 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 RBM41Q96IZ5 413 aaKnown RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 TGM7Q96PF1 710 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 GFM1Q96RP9 751 aaKnown RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 RBM4BQ9BQ04 359 aaKnown RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 C20orf24Q9BUV8 137 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 RBM4Q9BWF3 364 aaKnown RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 TEKT3Q9BXF9 490 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 SHCBP1LQ9BZQ2 653 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 LHPPQ9H008 270 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 FOXP1Q9H334 677 aaPredicted RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 ELOVL6Q9H5J4 265 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 NARFLQ9H6Q4 476 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 MARCH7Q9H992 704 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 LYRM4Q9HD34 91 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 NOX4Q9NPH5 578 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 PHPT1Q9NRX4 125 aaPredicted RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF275Q9NSD4 429 aaPredicted RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 SYBUQ9NX95 663 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 ASIC5Q9NY37 505 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 NLGN3Q9NZ94 848 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 ADAM22Q9P0K1 906 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 EPHA6Q9UF33 1036 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 ENPP5Q9UJA9 477 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 GGA2Q9UJY4 613 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF346Q9UL40 294 aaKnown RBP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 LAMP3Q9UQV4 416 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 TMED7Q9Y3B3 224 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 WDR45Q9Y484 360 aa3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.46□□□□□ -1.86
AC055720.1-201ENST00000539552 RALGAPA2Q2PPJ7 1873 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 RIC1Q4ADV7 1423 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 FN1P02751 2386 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TRBV5-7A0A0A0MS05 114 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TRBV11-1A0A0K0K1C0 115 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 LOC390937A0A1W2PQ73 354 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PLSCR5A0PG75 271 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TMEM120BA0PK00 339 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 SMCO3A2RU48 225 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 MTMR11A4FU01 709 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 F8W810 466 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 EIF3HO15372 352 aaKnown RBP eCLIP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 SNX3O60493 162 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 UGDHO60701 494 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 GRAP2O75791 330 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 NEURL1O76050 574 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 CLDN7O95471 211 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ESRRBO95718 433 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 RAF1P04049 648 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 FGF5P12034 268 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ZNF23P17027 643 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 GSTM3P21266 225 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PCSK6P29122 969 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 NDST1P52848 882 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TNNC1P63316 161 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 IRF8Q02556 426 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PLA2G7Q13093 441 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ILKQ13418 452 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 EXOSC2Q13868 293 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 DMC1Q14565 340 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TAF13Q15543 124 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 SYPL1Q16563 259 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 SMUG1Q53HV7 270 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ARMCX4Q5H9R4 360 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PAGE2BQ5JRK9 111 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 RHBDD2Q6NTF9 364 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 C11orf63Q6NUN7 778 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TMEM71Q6P5X7 295 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 MOB2Q70IA6 237 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TFAP2DQ7Z6R9 452 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 RBM45Q8IUH3 476 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 GPR65Q8IYL9 337 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 GABRG1Q8N1C3 465 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 BEST3Q8N1M1 668 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ARL14EPQ8N8R7 260 aaPredicted RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PNLDC1Q8NA58 520 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 THAP8Q8NA92 274 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PROKR2Q8NFJ6 384 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 OR5T3Q8NGG3 340 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 OR4A15Q8NGL6 344 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 OR5M8Q8NGP6 311 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 OR10Q1Q8NGQ4 319 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 OR1L4Q8NGR5 311 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 SPATA22Q8NHS9 363 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 OSR1Q8TAX0 266 aaPredicted RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 UBA3Q8TBC4 463 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 CACNG8Q8WXS5 425 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ARNTL2Q8WYA1 636 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 SMPDL3BQ92485 455 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 RPL3LQ92901 407 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 LHX4Q969G2 390 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 TAAR8Q969N4 342 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 LGALS12Q96DT0 336 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 ASB9Q96DX5 294 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 MRPL53Q96EL3 112 aaKnown RBP3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 GRAMD2BQ96HH9 432 aa3.45□□□□□ -1.86
AC055720.1-201ENST00000539552 PPP1R16AQ96I34 528 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms