RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 AOAHP28039 575 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 HHEXQ03014 270 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 OR2T11Q8NH01 316 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 KCND3Q9UK17 655 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 DNMT3AQ9Y6K1 912 aaPredicted RBP13.71□□□□□ -0.21
CACNB1-206ENST00000539338 ADAMTS7Q9UKP4 1686 aa13.71□□□□□ -0.21
CACNB1-206ENST00000539338 GKN3PP0CG01 181 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 PVALBP20472 110 aaPredicted RBP13.71□□□□□ -0.22
CACNB1-206ENST00000539338 LRRN1Q6UXK5 716 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 RBM12BQ8IXT5 1001 aaKnown RBP13.71□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF480Q8WV37 535 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 ASB11Q8WXH4 323 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 KCMF1Q9P0J7 381 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 PGCP20142 388 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 CD40LGP29965 261 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 HOXC13P31276 330 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 GALK2Q01415 458 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 BCL2L15Q5TBC7 163 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF691Q5VV52 312 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 LAIR1Q6GTX8 287 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 DESI1Q6ICB0 168 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 Q6ZPB1 254 aaPredicted RBP13.71□□□□□ -0.22
CACNB1-206ENST00000539338 SYT14Q8NB59 555 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 LKAAEAR1Q8TD35 194 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 TCEAL4Q96EI5 215 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 MS4A4EQ96PG1 132 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 ALG8Q9BVK2 526 aa13.71□□□□□ -0.22
CACNB1-206ENST00000539338 COL22A1Q8NFW1 1626 aaPredicted RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TRIM64CA6NLI5 447 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 SFTPBP07988 381 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TACR1P25103 407 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 HERV-K104P61576 105 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 SPCS2Q15005 226 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TP53I3Q53FA7 332 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 DCAF12Q5T6F0 453 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 HTR3DQ70Z44 454 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 CBLL1Q75N03 491 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TRMT10AQ8TBZ6 339 aaKnown RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 KHSRPQ92945 711 aaKnown RBP eCLIP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ZMYND19Q96E35 227 aaPredicted RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 SLC39A1Q9NY26 324 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 PPP4R1LQ9P1A2 415 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 MUTYHQ9UIF7 546 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 J3KTA2 159 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 SYNGR4O95473 234 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TFAP2AP05549 437 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF806P0C7X5 589 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF16P17020 682 aaPredicted RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 PSMB5P28074 263 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 NR4A2P43354 598 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 CTXN1P60606 82 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 OR13C3Q8NGS6 347 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ZFYVE21Q9BQ24 234 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 WDR83Q9BRX9 315 aaKnown RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 PPIL3Q9H2H8 161 aaKnown RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ZNF334Q9HCZ1 680 aaPredicted RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 USP36Q9P275 1121 aaKnown RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 KLHL21Q9UJP4 597 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 HYKKA2RU49 373 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 HSPA12AO43301 675 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 CDK1P06493 297 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 RBMXP38159 391 aaKnown RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 KIAA1211LQ6NV74 962 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 CNIH2Q6PI25 160 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ZER1Q7Z7L7 766 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TMEM173Q86WV6 379 aaPredicted RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 AGBL5Q8NDL9 886 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 KCNN1Q92952 543 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 TESCQ96BS2 214 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 DTD2Q96FN9 168 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ARL6Q9H0F7 186 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 CPNE5Q9HCH3 593 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 PLATP00750 562 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 SFTPCP11686 197 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 SLC5A2P31639 672 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 OTX2P32243 289 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 RIDAP52758 137 aaKnown RBP13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ACOT4Q8N9L9 421 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 STOML3Q8TAV4 291 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 DEFB126Q9BYW3 111 aa13.7□□□□□ -0.22
CACNB1-206ENST00000539338 ITGAMP11215 1152 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 POLR2IP36954 125 aaKnown RBP13.69□□□□□ -0.22
CACNB1-206ENST00000539338 PBX2P40425 430 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 NR0B1P51843 470 aaKnown RBP13.69□□□□□ -0.22
CACNB1-206ENST00000539338 ART1P52961 327 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 KIAA0895LQ68EN5 471 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 BAIAP2L2Q6UXY1 529 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 CCDC28AQ8IWP9 274 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 ITFG2Q969R8 447 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 ISG20Q96AZ6 181 aaKnown RBP13.69□□□□□ -0.22
CACNB1-206ENST00000539338 C7orf34Q96L11 122 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 PCDHA9Q9Y5H5 950 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 MYH9P35579 1960 aaKnown RBP13.69□□□□□ -0.22
CACNB1-206ENST00000539338 UBFD1O14562 309 aaKnown RBP13.69□□□□□ -0.22
CACNB1-206ENST00000539338 OR7A17O14581 309 aa13.69□□□□□ -0.22
CACNB1-206ENST00000539338 LYRM1O43325 122 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms