RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 RDH5Q92781 318 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 CCDC43Q96MW1 224 aaKnown RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 CBWD1Q9BRT8 395 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 SLC17A9Q9BYT1 436 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 NXF3Q9H4D5 531 aaKnown RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 PRMT8Q9NR22 394 aaPredicted RBP2.6□□□□□ -1.99
CCDC7-209ENST00000539197 STARD5Q9NSY2 213 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 BCAP29Q9UHQ4 241 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 PARD3Q8TEW0 1356 aa2.6□□□□□ -1.99
CCDC7-209ENST00000539197 PTPRUQ92729 1446 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 DHRS7CA6NNS2 312 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 DLGAP1O14490 977 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 STK17BO94768 372 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 SEMG1P04279 462 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 PGK2P07205 417 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 HMOX1P09601 288 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 SLC35G4P0C7Q5 338 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 HOXD10P28358 340 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 EMDP50402 254 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 HERVK_113P61574 105 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 HERVK_113P63132 956 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 ERVK-8P63133 956 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 DPYSQ14117 519 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 CYP51A1Q16850 503 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 C2orf76Q3KRA6 126 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 TOR1AIP1Q5JTV8 583 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 SLX4IPQ5VYV7 408 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 OR5M10Q6IEU7 315 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 PNCKQ6P2M8 343 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 ZFP2Q6ZN57 461 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 FRA10AC1Q70Z53 315 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 CSNK1A1LQ8N752 337 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 NEIL3Q8TAT5 605 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 DCUN1D4Q92564 292 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 DTD2Q96FN9 168 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 NDUFAF3Q9BU61 184 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 ERVK-6Q9BXR3 956 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 EHFQ9NZC4 300 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 HMG20BQ9P0W2 317 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 SMC3Q9UQE7 1217 aa2.59□□□□□ -1.99
CCDC7-209ENST00000539197 TDRKHQ9Y2W6 561 aaKnown RBP2.59□□□□□ -1.99
CCDC7-209ENST00000539197 NPC1L1Q9UHC9 1359 aa2.59□□□□□ -2
CCDC7-209ENST00000539197 E9PLD3 99 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 H3BMH7 237 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 PNPP00491 289 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 RPL4P36578 427 aaKnown RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 SUCLG1P53597 346 aaKnown RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 NUP107P57740 925 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 SRP54P61011 504 aaKnown RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 RPS6P62753 249 aaKnown RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 OC90Q02509 493 aaPredicted RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 RPA4Q13156 261 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 ZNF699Q32M78 642 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 ACSF3Q4G176 576 aaPredicted RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 AGKQ53H12 422 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 TEX44Q53QW1 395 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 LIPKQ5VXJ0 399 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 ETFRF1Q6IPR1 90 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 IGFL1Q6UW32 110 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 AMZ2Q86W34 360 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 KRTAP13-1Q8IUC0 172 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 ZNF100Q8IYN0 542 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 SFRP1Q8N474 314 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 WDR36Q8NI36 951 aaKnown RBP2.58□□□□□ -2
CCDC7-209ENST00000539197 BLOC1S5Q8TDH9 187 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 MCHR2Q969V1 340 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 FTHL17Q9BXU8 183 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 MARCH5Q9NX47 278 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 GHRLQ9UBU3 117 aa2.58□□□□□ -2
CCDC7-209ENST00000539197 KIF26AQ9ULI4 1882 aaPredicted RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 RAMP1O60894 148 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 SUPT7LO94864 414 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 ABHD2P08910 425 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 TBPP20226 339 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 DHPSP49366 369 aaPredicted RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 MYBPC1Q00872 1141 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 HFEQ30201 348 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 CYBRD1Q53TN4 286 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 IL23RQ5VWK5 629 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 ZNF57Q68EA5 555 aaPredicted RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 CXCL17Q6UXB2 119 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 VPS36Q86VN1 386 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 SPC24Q8NBT2 197 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 TMEM185AQ8NFB2 350 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 NEIL2Q969S2 332 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 SNX21Q969T3 373 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 FGGYQ96C11 551 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 NOL4LQ96MY1 436 aaPredicted RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 COQ7Q99807 217 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 MID1IP1Q9NPA3 183 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 MEPEQ9NQ76 525 aaPredicted RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 PNO1Q9NRX1 252 aaKnown RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 MBD2Q9UBB5 411 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 PHF11Q9UIL8 331 aa2.57□□□□□ -2
CCDC7-209ENST00000539197 ZNF490Q9ULM2 529 aaPredicted RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 EXOSC1Q9Y3B2 195 aaKnown RBP2.57□□□□□ -2
CCDC7-209ENST00000539197 TMEM89A2RUT3 159 aa2.56□□□□□ -2
CCDC7-209ENST00000539197 PPIHO43447 177 aaKnown RBP2.56□□□□□ -2
CCDC7-209ENST00000539197 CXCL14O95715 111 aa2.56□□□□□ -2
CCDC7-209ENST00000539197 CCNA2P20248 432 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms