RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 ERVK-19Q9WJR5 959 aa18.94■□□□□ 0.62
DDX55-205ENST00000538744 CDHR4A6H8M9 788 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 FADS2O95864 444 aaKnown RBP18.93■□□□□ 0.62
DDX55-205ENST00000538744 FOLR1P15328 257 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 TNNI3P19429 210 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 OR1D4P47884 311 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 PGDP52209 483 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 SNRPGP62308 76 aaKnown RBP18.93■□□□□ 0.62
DDX55-205ENST00000538744 NR0B2Q15466 257 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 CASP12Q6UXS9 341 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 CCDC81Q6ZN84 652 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 OR4C6Q8NH72 309 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 GGHQ92820 318 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 NUDT22Q9BRQ3 303 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 ACOT13Q9NPJ3 140 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 SERTAD3Q9UJW9 196 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 SLC6A14Q9UN76 642 aa18.93■□□□□ 0.62
DDX55-205ENST00000538744 TTC36A6NLP5 189 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 CDK1P06493 297 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 RFX3P48380 749 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 NUDT6P53370 316 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 LSM11P83369 360 aaKnown RBP eCLIP18.92■□□□□ 0.62
DDX55-205ENST00000538744 CSTF1Q05048 431 aaKnown RBP18.92■□□□□ 0.62
DDX55-205ENST00000538744 YOD1Q5VVQ6 348 aaPredicted RBP18.92■□□□□ 0.62
DDX55-205ENST00000538744 ZAR1Q86SH2 424 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 SAP25Q8TEE9 199 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 RAB2BQ8WUD1 216 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 TRUB1Q8WWH5 349 aaKnown RBP18.92■□□□□ 0.62
DDX55-205ENST00000538744 PIGKQ92643 395 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 PTCHD1Q96NR3 888 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 GPA33Q99795 319 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 OR10A5Q9H207 317 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 ZNF768Q9H5H4 540 aaKnown RBP18.92■□□□□ 0.62
DDX55-205ENST00000538744 Q9N2J8 555 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 DHCR7Q9UBM7 475 aaKnown RBP18.92■□□□□ 0.62
DDX55-205ENST00000538744 SDK1Q7Z5N4 2213 aa18.92■□□□□ 0.62
DDX55-205ENST00000538744 ARID1BQ8NFD5 2236 aaPredicted RBP18.92■□□□□ 0.62
DDX55-205ENST00000538744 TOX3O15405 576 aaPredicted RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 HYAL3O43820 417 aaPredicted RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 FMO6PO60774 539 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 ROR2Q01974 943 aaKnown RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 TSPAN31Q12999 210 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 DSG2Q14126 1118 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 HLA-BQ31612 363 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 ZC3H14Q6PJT7 736 aaKnown RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 PRICKLE2Q7Z3G6 844 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 NKAIN4Q8IVV8 208 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 EDAQ92838 391 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 AMBNQ9NP70 447 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 TESQ9UGI8 421 aaKnown RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 DTX4Q9Y2E6 619 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 PI4KAP42356 2102 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 UNC13CQ8NB66 2214 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 TRAPPC13A5PLN9 417 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 DSCR3O14972 297 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 YKT6O15498 198 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 ATE1O95260 518 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 THY1P04216 161 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 ATXN8OSP0DMR3 200 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 FBLP22087 321 aaKnown RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 SYT6Q5T7P8 510 aaPredicted RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 TMEM71Q6P5X7 295 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 NPSR1Q6W5P4 371 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 MBOAT2Q6ZWT7 520 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 ZNF615Q8N8J6 731 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 OR7G1Q8NGA0 311 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 C16orf52Q8NHV5 167 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.91■□□□□ 0.62
DDX55-205ENST00000538744 FCGR1BQ92637 280 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 Q96MT0 163 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 FUNDC2Q9BWH2 189 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 FGF21Q9NSA1 209 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 PRODH2Q9UF12 536 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 SLC7A7Q9UM01 511 aa18.91■□□□□ 0.62
DDX55-205ENST00000538744 EFCAB10A6NFE3 127 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 TRIM64BA6NI03 449 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 C17orf105B2RV13 164 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 IGKV1D-16P01601 117 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 GKN3PP0CG01 181 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 PRG2P13727 222 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 OMPP47874 163 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 SQSTM1Q13501 440 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 TMEM201Q5SNT2 666 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 QSOX2Q6ZRP7 698 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 STX19Q8N4C7 294 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 OR4N2Q8NGD1 307 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 OR8J1Q8NGP2 316 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 ZNF501Q96CX3 271 aaPredicted RBP18.9■□□□□ 0.62
DDX55-205ENST00000538744 FAM46AQ96IP4 442 aaKnown RBP18.9■□□□□ 0.62
DDX55-205ENST00000538744 IL4I1Q96RQ9 567 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 G6PC3Q9BUM1 346 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 ZNF304Q9HCX3 659 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 KRCC1Q9NPI7 259 aaPredicted RBP18.9■□□□□ 0.62
DDX55-205ENST00000538744 C14orf105Q9NVL8 296 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 GPR83Q9NYM4 423 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 CNOT2Q9NZN8 540 aaKnown RBP18.9■□□□□ 0.62
DDX55-205ENST00000538744 ASXL3Q9C0F0 2248 aa18.9■□□□□ 0.62
DDX55-205ENST00000538744 CPED1A4D0V7 1026 aa18.89■□□□□ 0.61
DDX55-205ENST00000538744 CT45A8P0DMV1 189 aa18.89■□□□□ 0.61
DDX55-205ENST00000538744 CT45A9P0DMV2 189 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms