RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 GDF7Q7Z4P5 450 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 GALNT12Q8IXK2 581 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 ZNF619Q8N2I2 560 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 WDR36Q8NI36 951 aaKnown RBP16.23■□□□□ 0.19
SNX17-210ENST00000537606 RNF217Q8TC41 542 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 TMEM255BQ8WV15 326 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 SNRNP27Q8WVK2 155 aaKnown RBP16.23■□□□□ 0.19
SNX17-210ENST00000537606 RIT1Q92963 219 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 PDE7BQ9NP56 450 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 AKIP1Q9NQ31 210 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 DUSP22Q9NRW4 184 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 DTX4Q9Y2E6 619 aa16.23■□□□□ 0.19
SNX17-210ENST00000537606 ANKRD33BA6NCL7 494 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 CLDN25C9JDP6 229 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 AGRPO00253 132 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 TLX2O43763 284 aaPredicted RBP16.22■□□□□ 0.19
SNX17-210ENST00000537606 PRKYO43930 277 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 S1PR1P21453 382 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 ZP2Q05996 745 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 NNATQ16517 81 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 NDUFA9Q16795 377 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 C12orf73Q69YU5 71 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 OGFOD3Q6PK18 319 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 ZNF614Q8N883 585 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 SLC41A3Q96GZ6 507 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 AHCYL2Q96HN2 611 aaKnown RBP16.22■□□□□ 0.19
SNX17-210ENST00000537606 GUCD1Q96NT3 240 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 PCED1AQ9H1Q7 454 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 UCK1Q9HA47 277 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 SLC7A7Q9UM01 511 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 PLCL2Q9UPR0 1127 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 SIT1Q9Y3P8 196 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 EML5Q05BV3 1969 aa16.22■□□□□ 0.19
SNX17-210ENST00000537606 EFCAB10A6NFE3 127 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 A8MU76 341 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 PRKNO60260 465 aaPredicted RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 PIP5K1CO60331 668 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 BMP4P12644 408 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 GIPRP48546 466 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 RGS6P49758 472 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 PGDP52209 483 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CLEC12AQ5QGZ9 265 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 EXOSC6Q5RKV6 272 aaKnown RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 PLAG1Q6DJT9 500 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 SLC25A45Q8N413 288 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CLDN23Q96B33 292 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CHCHD6Q9BRQ6 235 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CENPOQ9BU64 300 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 YIPF2Q9BWQ6 316 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 SLC25A19Q9HC21 320 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 PRTFDC1Q9NRG1 225 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 OSGIN1Q9UJX0 560 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 SH3D21A4FU49 640 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 TLCD2A6NGC4 264 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 HRO43593 1189 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 MPZL2O60487 215 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CNOT3O75175 753 aaKnown RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 DBTP11182 482 aaKnown RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 ALAS2P22557 587 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 SLC15A1P46059 708 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 GPR4P46093 362 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 ZNF136P52737 540 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 RPS3AP61247 264 aaKnown RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 POU6F2P78424 691 aaPredicted RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 PSG6Q00889 435 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 COX10Q12887 443 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 ZNF267Q14586 743 aaPredicted RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 NRMQ8IXM6 262 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 VMP1Q96GC9 406 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CNPPD1Q9BV87 410 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 IL20RAQ9UHF4 553 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 ARID1BQ8NFD5 2236 aaPredicted RBP16.21■□□□□ 0.19
SNX17-210ENST00000537606 RP1P56715 2156 aa16.21■□□□□ 0.19
SNX17-210ENST00000537606 CTNSO60931 367 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 IFNA8P32881 189 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 MAP3K8P41279 467 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 AFF3P51826 1226 aaKnown RBP16.2■□□□□ 0.18
SNX17-210ENST00000537606 SNRPGP62308 76 aaKnown RBP16.2■□□□□ 0.18
SNX17-210ENST00000537606 TSTQ16762 297 aaKnown RBP16.2■□□□□ 0.18
SNX17-210ENST00000537606 PAQR6Q6TCH4 344 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 OR6Q1Q8NGQ2 317 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 OR51Q1Q8NH59 317 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 STACQ99469 402 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 CLDN16Q9Y5I7 305 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 WDFY4Q6ZS81 3184 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.2■□□□□ 0.18
SNX17-210ENST00000537606 KCNK2O95069 426 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 NSA2O95478 260 aaKnown RBP16.2■□□□□ 0.18
SNX17-210ENST00000537606 RANBP1P43487 201 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 EMDP50402 254 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 CFHR1Q03591 330 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 FAM53BQ14153 422 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 PERM1Q5SV97 790 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 CD300LDQ6UXZ3 194 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 DCDC5Q6ZRR9 648 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 CENPSQ8N2Z9 138 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 MFSD4AQ8N468 514 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 OR8D4Q8NGM9 314 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 DNASE2BQ8WZ79 361 aa16.2■□□□□ 0.18
SNX17-210ENST00000537606 ZDHHC12Q96GR4 267 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms