RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 RMND5AQ9H871 391 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 SAR1AQ9NR31 198 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 FAM53CQ9NYF3 392 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 MED11Q9P086 117 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 SH3BGRL2Q9UJC5 107 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 ERRFI1Q9UJM3 462 aaPredicted RBP16.29■□□□□ 0.2
DDX55-204ENST00000536079 TINAGQ9UJW2 476 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 ABCG2Q9UNQ0 655 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 POLEQ07864 2286 aa16.29■□□□□ 0.2
DDX55-204ENST00000536079 ESPL1Q14674 2120 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 OIP5O43482 229 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 TRAPPC6AO75865 159 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 HPNP05981 417 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 LSP1P33241 339 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 PSMD4P55036 377 aaKnown RBP16.28■□□□□ 0.2
DDX55-204ENST00000536079 CD226Q15762 336 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 ARHGAP11BQ3KRB8 267 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 EMC4Q5J8M3 183 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 WIPI1Q5MNZ9 446 aaPredicted RBP16.28■□□□□ 0.2
DDX55-204ENST00000536079 Q6ZPB1 254 aaPredicted RBP16.28■□□□□ 0.2
DDX55-204ENST00000536079 NCCRP1Q6ZVX7 275 aaPredicted RBP16.28■□□□□ 0.2
DDX55-204ENST00000536079 HMGN2P46Q86SG4 172 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 PLCZ1Q86YW0 608 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 C10orf111Q8N326 155 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 ANKFN1Q8N957 763 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 FADS6Q8N9I5 356 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 FAM83FQ8NEG4 500 aaPredicted RBP16.28■□□□□ 0.2
DDX55-204ENST00000536079 OR2M3Q8NG83 312 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 DSN1Q9H410 356 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 RABEP2Q9H5N1 569 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 TPT1P8Q9HAU6 139 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 ACKR4Q9NPB9 350 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 TMEM45AQ9NWC5 275 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 SLC6A5Q9Y345 797 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 MYO18BQ8IUG5 2567 aa16.28■□□□□ 0.2
DDX55-204ENST00000536079 RP1L1Q8IWN7 2480 aaPredicted RBP16.27■□□□□ 0.2
DDX55-204ENST00000536079 A0A096LPI6 279 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 TRBV5-3A0A0A0MS03 114 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 TRGV5A0A0B4J1U4 118 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 A0A1W2PP18 115 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 ALG1L2C9J202 215 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 GMFGO60234 142 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 ANGPTL1O95841 491 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 NGFRP08138 427 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 ETFAP13804 333 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 TCEA1P23193 301 aaKnown RBP16.27■□□□□ 0.2
DDX55-204ENST00000536079 ELAVL4P26378 380 aaKnown RBP16.27■□□□□ 0.2
DDX55-204ENST00000536079 DCTP40126 519 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 KHKP50053 298 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 GNGT1P63211 74 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 SYPL1Q16563 259 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 NDUFAF6Q330K2 333 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 LRIF1Q5T3J3 769 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 DLEU7Q6UYE1 221 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 C3P1Q6ZMU1 363 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 DOLPP1Q86YN1 238 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 TRIML2Q8N7C3 387 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 ZG16BQ96DA0 208 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 ELAC2Q9BQ52 826 aaKnown RBP16.27■□□□□ 0.2
DDX55-204ENST00000536079 G6PC3Q9BUM1 346 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 TBL1XR1Q9BZK7 514 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 NMUR2Q9GZQ4 415 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 IKZF5Q9H5V7 419 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 UBQLN4Q9NRR5 601 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 QPCTLQ9NXS2 382 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 VAPAQ9P0L0 249 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 PPP4R1LQ9P1A2 415 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 MKLN1Q9UL63 735 aa16.27■□□□□ 0.2
DDX55-204ENST00000536079 ZNF407Q9C0G0 2248 aa16.27■□□□□ 0.19
DDX55-204ENST00000536079 TRGV8A0A0C4DH27 118 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 DUXAA6NLW8 204 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 NPIPA2E9PIF3 369 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 NPIPA3F8WFD2 350 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 FBP2O00757 339 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 LRRTM2O43300 516 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 ZIC3O60481 467 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 ANP32DO95626 131 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 CHRM4P08173 479 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 NUDT7P0C024 238 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 PTGS2P35354 604 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
DDX55-204ENST00000536079 KLF10Q13118 480 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 TOMM20Q15388 145 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 MAPK14Q16539 360 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 FLYWCH1Q4VC44 716 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 KLHL26Q53HC5 615 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 DCST1Q5T197 706 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 TYW3Q6IPR3 259 aaKnown RBP16.26■□□□□ 0.19
DDX55-204ENST00000536079 FJX1Q86VR8 437 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 OR5M9Q8NGP3 310 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 NEIL3Q8TAT5 605 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 FAM57AQ8TBR7 257 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 ZNF524Q96C55 264 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 ROPN1LQ96C74 230 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 TRIM8Q9BZR9 551 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 ZNF350Q9GZX5 532 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 FAM107BQ9H098 131 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 LDAHQ9H6V9 325 aa16.26■□□□□ 0.19
DDX55-204ENST00000536079 B4GALT7Q9UBV7 327 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms