RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 Q9H3A6 140 aa3.38□□□□□ -1.87
PRKDC-205ENST00000535375 RAD54L2Q9Y4B4 1467 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 F8WDY8 70 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 K7EPI3 171 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ADAM12O43184 909 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 STK17BO94768 372 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ANP32DO95626 131 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF853P0CG23 659 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 CYP11B1P15538 503 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF32P17041 273 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 MAGEA4P43358 317 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 SLC6A8P48029 635 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 GMFBP60983 142 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 GNB2P62879 340 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 SPP2Q13103 211 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 PDIA5Q14554 519 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 PARP6Q2NL67 630 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF699Q32M78 642 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 TRPM8Q7Z2W7 1104 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 P4HA3Q7Z4N8 544 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 LRRC17Q8N6Y2 441 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 CSNK1A1LQ8N752 337 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ZBTB44Q8NCP5 570 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 OR10H4Q8NGA5 316 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ANKRD49Q8WVL7 239 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 NDUFAF3Q9BU61 184 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 NMNAT2Q9BZQ4 307 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 PTGES2Q9H7Z7 377 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 ECT2Q9H8V3 914 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 MYOZ2Q9NPC6 264 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 NGBQ9NPG2 151 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 POLE3Q9NRF9 147 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 DUS2Q9NX74 493 aaKnown RBP3.37□□□□□ -1.87
PRKDC-205ENST00000535375 IL20RAQ9UHF4 553 aa3.37□□□□□ -1.87
PRKDC-205ENST00000535375 E9PLD3 99 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 H3BMH7 237 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 ZCCHC18P0CG32 403 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF17P17021 662 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 DESP17661 470 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 MDKP21741 143 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 PRDX6P30041 224 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 HPDP32754 393 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 NUMBP49757 651 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 KARSQ15046 597 aaKnown RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 CEBPEQ15744 281 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 CYP51A1Q16850 503 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 SPATA46Q5T0L3 261 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 METTL11BQ5VVY1 283 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 LIPKQ5VXJ0 399 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 GOLGA7Q7Z5G4 137 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF397Q8NF99 534 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 C16orf45Q96MC5 204 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF184Q99676 751 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 EBF4Q9BQW3 602 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 CNPY3Q9BT09 278 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 HES7Q9BYE0 225 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 RAB17Q9H0T7 212 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 MEPEQ9NQ76 525 aaPredicted RBP3.36□□□□□ -1.87
PRKDC-205ENST00000535375 MBD2Q9UBB5 411 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 ATP8B3O60423 1300 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 NCAPD2Q15021 1401 aa3.36□□□□□ -1.87
PRKDC-205ENST00000535375 B4DXG7 233 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF861PO60384 105 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 SMPD2O60906 423 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 SLC35G4P0C7Q5 338 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 GABRR1P24046 479 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ACAA2P42765 397 aaKnown RBP3.35□□□□□ -1.87
PRKDC-205ENST00000535375 EFNA3P52797 238 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 RPS6P62753 249 aaKnown RBP3.35□□□□□ -1.87
PRKDC-205ENST00000535375 HERVK_113P63132 956 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ERVK-8P63133 956 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 SNX1Q13596 522 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF658BQ4V348 819 aaPredicted RBP3.35□□□□□ -1.87
PRKDC-205ENST00000535375 AGKQ53H12 422 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 SLX4IPQ5VYV7 408 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF57Q68EA5 555 aaPredicted RBP3.35□□□□□ -1.87
PRKDC-205ENST00000535375 RAET1GQ6H3X3 334 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 UFSP1Q6NVU6 142 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 IRGCQ6NXR0 463 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 PNCKQ6P2M8 343 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 AMZ2Q86W34 360 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 MKXQ8IYA7 352 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 WDR36Q8NI36 951 aaKnown RBP3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ADAMTS16Q8TE57 1224 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 CCDC51Q96ER9 411 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 NICN1Q9BSH3 213 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 ERVK-6Q9BXR3 956 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 EHFQ9NZC4 300 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 GHRLQ9UBU3 117 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 BLOC1S6Q9UL45 172 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 PLA2G4CQ9UP65 541 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 AURKCQ9UQB9 309 aa3.35□□□□□ -1.87
PRKDC-205ENST00000535375 DHRS7CA6NNS2 312 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 PANO1I0J062 215 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 TBL1XO60907 577 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 ZNF254O75437 659 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 TOXO94900 526 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 FUT3P21217 361 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 SLC26A5P58743 744 aa3.34□□□□□ -1.87
PRKDC-205ENST00000535375 POLR2FP61218 127 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms