RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ETFAP13804 333 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 DCTP40126 519 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 PSPHP78330 225 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 KLF10Q13118 480 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 ELOAQ14241 798 aaKnown RBP12.78□□□□□ -0.36
VPS11-205ENST00000534551 TOMM20Q15388 145 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 C3AR1Q16581 482 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 HYAL4Q2M3T9 481 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 EIPR1Q53HC9 387 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 TIGD3Q6B0B8 471 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 TRILQ7L0X0 811 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 C16orf62Q7Z3J2 963 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 SPATA21Q7Z572 469 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 YRDCQ86U90 279 aaKnown RBP12.78□□□□□ -0.36
VPS11-205ENST00000534551 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 ZNF614Q8N883 585 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 ANKFN1Q8N957 763 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 OR1J4Q8NGS1 313 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 XAGE5Q8WWM1 108 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 SDF2Q99470 211 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 QRSL1Q9H0R6 528 aaKnown RBP12.78□□□□□ -0.36
VPS11-205ENST00000534551 RUBCNLQ9H714 662 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 RYDENQ9NUL5 291 aaKnown RBP12.78□□□□□ -0.36
VPS11-205ENST00000534551 VAPAQ9P0L0 249 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 PPP4R1LQ9P1A2 415 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 KCNE5Q9UJ90 142 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 ABCG2Q9UNQ0 655 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 SLC6A5Q9Y345 797 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 PCDHB14Q9Y5E9 798 aa12.78□□□□□ -0.36
VPS11-205ENST00000534551 PHF3Q92576 2039 aaKnown RBP12.78□□□□□ -0.36
VPS11-205ENST00000534551 A0A096LPI6 279 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 TRBV5-3A0A0A0MS03 114 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 FBP2O00757 339 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 FCMRO60667 390 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 SLC19A2O60779 497 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 SEMA7AO75326 666 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 TRAPPC6AO75865 159 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 ANGPTL1O95841 491 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 CHRM4P08173 479 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 NUDT7P0C024 238 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 ATP6V1C1P21283 382 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 PSMD4P55036 377 aaKnown RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 GPR68Q15743 365 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 MAPK11Q15759 364 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 SYPL1Q16563 259 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 FLYWCH1Q4VC44 716 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 WIPI1Q5MNZ9 446 aaPredicted RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 DCST1Q5T197 706 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 HEPHL1Q6MZM0 1159 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 C3P1Q6ZMU1 363 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 GHDCQ8N2G8 530 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 TRIML2Q8N7C3 387 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 CHDHQ8NE62 594 aaPredicted RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 FAM83FQ8NEG4 500 aaPredicted RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 OR2M3Q8NG83 312 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 ROPN1LQ96C74 230 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 SH3YL1Q96HL8 342 aaPredicted RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 PHF12Q96QT6 1004 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 TBL1XR1Q9BZK7 514 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 ZNF350Q9GZX5 532 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 TPT1P8Q9HAU6 139 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 FAM53CQ9NYF3 392 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 MED11Q9P086 117 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 B4GALT7Q9UBV7 327 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 MRTO4Q9UKD2 239 aaKnown RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 MKLN1Q9UL63 735 aa12.77□□□□□ -0.37
VPS11-205ENST00000534551 NCOA6Q14686 2063 aaPredicted RBP12.77□□□□□ -0.37
VPS11-205ENST00000534551 DOPEY2Q9Y3R5 2298 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 PCNX1Q96RV3 2341 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 TRGV8A0A0C4DH27 118 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 A0A1W2PP18 115 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 SHISA8B8ZZ34 492 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 NPIPA2E9PIF3 369 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 NPIPB9F8W1W9 429 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 NPIPA3F8WFD2 350 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 BCAS1O75363 584 aaPredicted RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 IGHG3P01860 377 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 ZCCHC18P0CG32 403 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 ABOP16442 354 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 TBXA2RP21731 343 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 ELAVL4P26378 380 aaKnown RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 LRRC74AQ0VAA2 488 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 SNTA1Q13424 505 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 SELPLGQ14242 412 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 CAPRIN1Q14444 709 aaKnown RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 ARHGAP11BQ3KRB8 267 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 GPAT3Q53EU6 434 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 RPS26P11Q5JNZ5 115 aaPredicted RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 LRIF1Q5T3J3 769 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 METTL21CQ5VZV1 264 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 TYW3Q6IPR3 259 aaKnown RBP12.76□□□□□ -0.37
VPS11-205ENST00000534551 DLEU7Q6UYE1 221 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 FRRS1Q6ZNA5 592 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 DHDDSQ86SQ9 333 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 CD163Q86VB7 1156 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 SNX32Q86XE0 403 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 PLCZ1Q86YW0 608 aa12.76□□□□□ -0.37
VPS11-205ENST00000534551 POU5F2Q8N7G0 328 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms