RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	EMC7	Q9NPA0	242 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MRPL39	Q9NYK5	338 aa	Known RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CNIH4	Q9P003	139 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SEC14L3	Q9UDX4	400 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	APOBEC3B	Q9UH17	382 aa	Known RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GPSM3	Q9Y4H4	160 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	OR6C65	A6NJZ3	312 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GPR89A	B7ZAQ6	455 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SMLR1	H3BR10	107 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SLC30A4	O14863	429 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MYL12B	O14950	172 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	NDUFB5	O43674	189 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	NARS	O43776	548 aa	Known RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SH3BP5	O60239	455 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	FCMR	O60667	390 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	RFPL3	O75679	317 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CSF2	P04141	144 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GPR89B	P0CG08	455 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MYL12A	P19105	171 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TNNI3	P19429	210 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	HIST1H1T	P22492	207 aa	Predicted RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	AVPR1B	P47901	424 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MMP15	P51511	669 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	PDX1	P52945	283 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	NTHL1	P78549	312 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CNTN1	Q12860	1018 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	DUSP8	Q13202	625 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	HIST2H2AA3	Q6FI13	130 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	RAET1G	Q6H3X3	334 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TEX261	Q6UWH6	196 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF836	Q6ZNA1	936 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TMPRSS11F	Q6ZWK6	438 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF767P	Q75MW2	155 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	VN1R4	Q7Z5H5	301 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	LRRC28	Q86X40	367 aa	Predicted RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GPALPP1	Q8IXQ4	340 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	ELMOD2	Q8IZ81	293 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	RFLNB	Q8N5W9	214 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TMEM99	Q8N816	258 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	KREMEN2	Q8NCW0	462 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	C17orf47	Q8NEP4	570 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TOR1AIP2	Q8NFQ8	470 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	DEDD2	Q8WXF8	326 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	THAP4	Q8WY91	577 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	AP3S1	Q92572	193 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	RAD51AP1	Q96B01	352 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	FOPNL	Q96NB1	174 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	HDHD5	Q9BXW7	423 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	BEX2	Q9BXY8	128 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	PCBD2	Q9H0N5	130 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	OSGEPL1	Q9H4B0	414 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	NPDC1	Q9NQX5	325 aa	Predicted RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CREBZF	Q9NS37	354 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MCUB	Q9NWR8	336 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	INSL6	Q9Y581	213 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	WNT6	Q9Y6F9	365 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897		U3KQ87	197 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TRAV1-2	A0A0B4J238	106 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	LOC102723532	A0A0G2JNH3	316 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	ANKDD1B	A6NHY2	528 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CCL16	O15467	120 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	EFCAB14	O75071	495 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	LDB3	O75112	727 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	RGS9	O75916	674 aa	Predicted RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	APOL3	O95236	402 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	FGF19	O95750	216 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	THBS1	P07996	1170 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	RHO	P08100	348 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	NGFR	P08138	427 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CD37	P11049	281 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SLC2A2	P11168	524 aa	Predicted RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TYRP1	P17643	537 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CXCL3	P19876	107 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SOAT1	P35610	550 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	AHR	P35869	848 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CD83	Q01151	205 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	DMWD	Q09019	674 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	C1D	Q13901	141 aa	Known RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TRAM2	Q15035	370 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GSG1	Q2KHT4	349 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	HSD17B12	Q53GQ0	312 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TMEM255A	Q5JRV8	349 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GARNL3	Q5VVW2	1013 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	C18orf63	Q68DL7	685 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	GPR139	Q6DWJ6	353 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SSX6	Q7RTT6	188 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	HDDC3	Q8N4P3	179 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	FBXL6	Q8N531	539 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	ZNF366	Q8N895	744 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	ZFP41	Q8N8Y5	198 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	WFIKKN2	Q8TEU8	576 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	CTHRC1	Q96CG8	243 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	BTBD1	Q9H0C5	482 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	UBQLN3	Q9H347	655 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	TRPV4	Q9HBA0	871 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MEPE	Q9NQ76	525 aa	Predicted RBP	4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	MIEF1	Q9NQG6	463 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	C20orf141	Q9NUB4	165 aa		4.11	□□□□□ -1.75
CTSC-208	ENST00000533897	SERTAD3	Q9UJW9	196 aa		4.11	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms