RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 PRKDCP78527 4128 aaKnown RBP6.92□□□□□ -1.3
NXF1-215ENST00000533440 LOC100289279A0A1B0GTE1 492 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 CXorf49A8MYA2 514 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 VWC2LB2RUY7 222 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 E7EQL1 145 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 H7C417 338 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 TP73O15350 636 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 PLOD3O60568 738 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 SYNGR4O95473 234 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 CSF3P09919 207 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 ZNF17P17021 662 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 ITGA2P17301 1181 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 PSMA4P25789 261 aaKnown RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 ARL4CP56559 192 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 PSG6Q00889 435 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 GALNT1Q10472 559 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 STX5Q13190 355 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 ITGADQ13349 1161 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 GTF2H2Q13888 395 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 FAM174BQ3ZCQ3 159 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 LGSNQ5TDP6 509 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 FRG2Q64ET8 278 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 GTF2H2CQ6P1K8 395 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 ESPNLQ6ZVH7 1005 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 NUFIP2Q7Z417 695 aaKnown RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 COMMD6Q7Z4G1 85 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 GOLGA7Q7Z5G4 137 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 TBC1D1Q86TI0 1168 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 CCDC25Q86WR0 208 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 WDR75Q8IWA0 830 aaKnown RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 SLC44A2Q8IWA5 706 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 CCDC116Q8IYX3 515 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 GTPBP8Q8N3Z3 284 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 OR2V1Q8NHB1 315 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 SGMS2Q8NHU3 365 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 RHEBL1Q8TAI7 183 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 ACTRT1Q8TDG2 376 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 HTRA1Q92743 480 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 KAT2AQ92830 837 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 KISS1RQ969F8 398 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 ZMYND19Q96E35 227 aaPredicted RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 RADILQ96JH8 1075 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 FRG2BQ96QU4 278 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 RBBP8Q99708 897 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 PRR14Q9BWN1 585 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 IPPKQ9H8X2 491 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 EML4Q9HC35 981 aaKnown RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 FAM120CQ9NX05 1096 aaKnown RBP6.91□□□□□ -1.3
NXF1-215ENST00000533440 FLRT3Q9NZU0 649 aa6.91□□□□□ -1.3
NXF1-215ENST00000533440 A0A087WZY1 265 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 A0A0J9YW62 118 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 GOLGA6L10A0A0M3HER8 536 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 C7orf72A4D263 438 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 SYCE1LA8MT33 242 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 ZNF814B7Z6K7 855 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 OR7A17O14581 309 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 ABCD4O14678 606 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 TNFSF11O14788 317 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 CLDN9O95484 217 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 NTN1O95631 604 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 ADAP00813 363 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 LTA4HP09960 611 aaKnown RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 GP5P40197 560 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 COMPP49747 757 aaPredicted RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 EFNA4P52798 201 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 ALDH18A1P54886 795 aaKnown RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 TRA2BP62995 288 aaKnown RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 RAC1P63000 192 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 C17orf67Q0P5P2 114 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 PDIA2Q13087 525 aaKnown RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 PPA1Q15181 289 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 PFKFB4Q16877 469 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 ERCC6LQ2NKX8 1250 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 CYP27C1Q4G0S4 372 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 TMEM201Q5SNT2 666 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 METTL2BQ6P1Q9 378 aaKnown RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 APOOLQ6UXV4 268 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 Q6ZSR9 355 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 BHLHA15Q7RTS1 189 aaPredicted RBP6.9□□□□□ -1.3
NXF1-215ENST00000533440 SSX8Q7RTT4 187 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 MARCH3Q86UD3 253 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 TDRPQ86YL5 185 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 TUSC5Q8IXB3 177 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 MUC15Q8N387 334 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 BANPQ8N9N5 519 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 OR9A2Q8NGT5 310 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 RNF128Q8TEB7 428 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 NXNL1Q96CM4 212 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 CDK15Q96Q40 435 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 NPAS1Q99742 590 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 CPNE1Q99829 537 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 DHRS9Q9BPW9 319 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 FAIM2Q9BWQ8 316 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 GP6Q9HCN6 339 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 TAS2R9Q9NYW1 312 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 NPAP1Q9NZP6 1156 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 KLHL13Q9P2N7 655 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 UTS2RQ9UKP6 389 aa6.9□□□□□ -1.3
NXF1-215ENST00000533440 VDAC3Q9Y277 283 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms