RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 DDX18Q9NVP1 670 aaKnown RBP17.16■□□□□ 0.34
SSH3-209ENST00000532600 CLCF1Q9UBD9 225 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 TMED5Q9Y3A6 229 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 USH1CQ9Y6N9 552 aa17.16■□□□□ 0.34
SSH3-209ENST00000532600 GOLGA8QA0A0J9YX86 632 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 FAM221AA4D161 298 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 GOLGA8OA6NCC3 632 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 CLCA1A8K7I4 914 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 GOLGA8NF8WBI6 632 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 SLCO1B7G3V0H7 640 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 PDPK1O15530 556 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 TBX19O60806 448 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 EDF1O60869 148 aaKnown RBP17.15■□□□□ 0.34
SSH3-209ENST00000532600 CTAG2O75638 210 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 IL33O95760 270 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 ALDOCP09972 364 aaKnown RBP17.15■□□□□ 0.34
SSH3-209ENST00000532600 ZNF708P17019 499 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 CTSSP25774 331 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 DPP4P27487 766 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 MDH1P40925 334 aaKnown RBP17.15■□□□□ 0.34
SSH3-209ENST00000532600 DIO3P55073 304 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 CLDN15P56746 228 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 EMX2Q04743 252 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 APOOLQ6UXV4 268 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 TMEM200AQ86VY9 491 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 OR2M3Q8NG83 312 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 OR52B2Q96RD2 323 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 DSN1Q9H410 356 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 CCDC134Q9H6E4 229 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 REEP4Q9H6H4 257 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 RPH3AQ9Y2J0 694 aaPredicted RBP17.15■□□□□ 0.34
SSH3-209ENST00000532600 MED12LQ86YW9 2145 aa17.15■□□□□ 0.34
SSH3-209ENST00000532600 H0Y3Z8 333 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 G6PDP11413 515 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 EFNA1P20827 205 aaPredicted RBP17.14■□□□□ 0.33
SSH3-209ENST00000532600 GABRA3P34903 492 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 KIR2DL3P43628 341 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 GYS2P54840 703 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 PTGR1Q14914 329 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 SF3B4Q15427 424 aaKnown RBP eCLIP17.14■□□□□ 0.33
SSH3-209ENST00000532600 EPGNQ6UW88 154 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 MARCH3Q86UD3 253 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 PIK3R3Q92569 461 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 THOC1Q96FV9 657 aaKnown RBP17.14■□□□□ 0.33
SSH3-209ENST00000532600 SFXN2Q96NB2 322 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 SLC24A3Q9HC58 644 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 ASIC5Q9NY37 505 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 FAM53CQ9NYF3 392 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 MED11Q9P086 117 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 NTMQ9P121 344 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 DKKL1Q9UK85 242 aa17.14■□□□□ 0.33
SSH3-209ENST00000532600 TRPC5OSA6NMA1 111 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 HCRTR2O43614 444 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 TGM6O95932 706 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 IL18BPO95998 194 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 TMIGD3P0DMS9 266 aaPredicted RBP17.13■□□□□ 0.33
SSH3-209ENST00000532600 LBPP18428 481 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 CHMP24386 653 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 IDH3AP50213 366 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 DSCR4P56555 118 aaPredicted RBP17.13■□□□□ 0.33
SSH3-209ENST00000532600 MRPS22P82650 360 aaKnown RBP17.13■□□□□ 0.33
SSH3-209ENST00000532600 STX5Q13190 355 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 RCAN2Q14206 197 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 DECR1Q16698 335 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 SMU1Q2TAY7 513 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 EXOSC6Q5RKV6 272 aaKnown RBP17.13■□□□□ 0.33
SSH3-209ENST00000532600 OGFOD2Q6N063 350 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 CGB2Q6NT52 195 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 ENPP6Q6UWR7 440 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 ZAR1Q86SH2 424 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 KRTCAP2Q8N6L1 136 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 OR4K17Q8NGC6 315 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 EBF4Q9BQW3 602 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 GPATCH1Q9BRR8 931 aaKnown RBP17.13■□□□□ 0.33
SSH3-209ENST00000532600 LIME1Q9H400 295 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 Q9N2J8 555 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 EQTNQ9NQ60 294 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 FAM120CQ9NX05 1096 aaKnown RBP17.13■□□□□ 0.33
SSH3-209ENST00000532600 PPP4R1LQ9P1A2 415 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 ABCG2Q9UNQ0 655 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 AKAP6Q13023 2319 aa17.13■□□□□ 0.33
SSH3-209ENST00000532600 H0YC42 278 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 DIAPH2O60879 1101 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 NKX2-2O95096 273 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 RCBTB2O95199 551 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 UTS2O95399 124 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 ACP2P11117 423 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 PRPS2P11908 318 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 DNAJA1P31689 397 aaKnown RBP17.12■□□□□ 0.33
SSH3-209ENST00000532600 OPRM1P35372 400 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 GCKP35557 465 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 TPD52P55327 224 aaPredicted RBP17.12■□□□□ 0.33
SSH3-209ENST00000532600 GRAMD1BQ3KR37 738 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 FLYWCH1Q4VC44 716 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 GALNT10Q86SR1 603 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 OR5M1Q8NGP8 315 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 RFWD2Q8NHY2 731 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 ACTRT2Q8TDY3 377 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 DUSP19Q8WTR2 217 aa17.12■□□□□ 0.33
SSH3-209ENST00000532600 WNT2BQ93097 391 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms