RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	TRNT1	Q96Q11	434 aa	Known RBP	13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	MAPKAP1	Q9BPZ7	522 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	MACROD1	Q9BQ69	325 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	B3GNT4	Q9C0J1	378 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	RNF167	Q9H6Y7	350 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	SMURF1	Q9HCE7	757 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	LYRM4	Q9HD34	91 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	MYNN	Q9NPC7	610 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	TBC1D24	Q9ULP9	559 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	CAB39	Q9Y376	341 aa	Predicted RBP	13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF451	Q9Y4E5	1061 aa		13.61	□□□□□ -0.23
NR1H3-231	ENST00000529540		A0A1B0GX78	115 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	BLACE	A4D250	179 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	CCRL2	O00421	344 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SCRG1	O75711	98 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	TLX1	P31314	330 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	BUD31	P41223	144 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	LIMS1	P48059	325 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	NUDT6	P53370	316 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	RAE1	P78406	368 aa	Known RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPIB	Q01892	262 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	GPR50	Q13585	617 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	EXOC3L2	Q2M3D2	409 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	DCAF12	Q5T6F0	453 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	CPTP	Q5TA50	214 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	TMEM164	Q5U3C3	297 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	GDPGP1	Q6ZNW5	385 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	NATD1	Q8N6N6	113 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	C7orf57	Q8NEG2	295 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPPL2A	Q8TCT8	520 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	ADAMTS14	Q8WXS8	1223 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	MTERF3	Q96E29	417 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	C10orf90	Q96M02	699 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	WDFY2	Q96P53	400 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	DDA1	Q9BW61	102 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPRTN	Q9H040	489 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	LHX9	Q9NQ69	397 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	STARD5	Q9NSY2	213 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	IMPAD1	Q9NX62	359 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC39A1	Q9NY26	324 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	N6AMT1	Q9Y5N5	214 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	ADAMTS20	P59510	1910 aa		13.6	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC35F4	A4IF30	521 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ANKRD34B	A5PLL1	514 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	RNASET2	O00584	256 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	PLD2	O14939	933 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF749	O43361	778 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	CPNE3	O75131	537 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	TNFRSF21	O75509	655 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	KLHL18	O94889	574 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	STATH	P02808	62 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	DRD2	P14416	443 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	CHM	P24386	653 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	RPS5	P46782	204 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	GCGR	P47871	477 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	IDH2	P48735	452 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	HMGA2	P52926	109 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	CDC42	P60953	191 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLAMF1	Q13291	335 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	GAB1	Q13480	694 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	TST	Q16762	297 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	SPATC1	Q76KD6	591 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	B3GNT7	Q8NFL0	401 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF764	Q96H86	408 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	CEP19	Q96LK0	163 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	TAAR9	Q96RI9	348 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	MGLL	Q99685	303 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	NIPSNAP1	Q9BPW8	284 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	AICDA	Q9GZX7	198 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF556	Q9HAH1	456 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	AMBN	Q9NP70	447 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	RLIM	Q9NVW2	624 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	OCIAD1	Q9NX40	245 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ATP6V1H	Q9UI12	483 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	FAM186A	A6NE01	2351 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZAR1L	A6NP61	321 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	GABRR3	A8MPY1	467 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	RTCA	O00442	366 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	SCO2	O43819	266 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	CBL	P22681	906 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	CERS1	P27544	350 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	MVD	P53602	400 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	RHAG	Q02094	409 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	GCNT6	Q5T4J0	391 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	C6orf183	Q5T699	404 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	MRM1	Q6IN84	353 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	ZNF793	Q6ZN11	406 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	TTLL10	Q6ZVT0	673 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	SIMC1	Q8NDZ2	872 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	C16orf78	Q8WTQ4	265 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	LRFN5	Q96NI6	719 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	MIEF1	Q9NQG6	463 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	DAPP1	Q9UN19	280 aa		13.59	□□□□□ -0.23
NR1H3-231	ENST00000529540	MRPS33	Q9Y291	106 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms