RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ANKRD60Q9BZ19 345 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 TMEM38AQ9H6F2 299 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 TRPM6Q9BX84 2022 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 A0A0G2JMZ2 1700 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SH3D21A4FU49 640 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 CCDC182A6NF36 153 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 MT-ND2P03891 347 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 PRKCAP17252 672 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 F8A1P23610 371 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SLC15A1P46059 708 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 CTXN1P60606 82 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 RPS3AP61247 264 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 CBFBQ13951 182 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SPATC1Q76KD6 591 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 IFI44Q8TCB0 444 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 TRUB1Q8WWH5 349 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 NSMAFQ92636 917 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 SAMD8Q96LT4 415 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 TM9SF2Q99805 663 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 CTRCQ99895 268 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 LMF2Q9BU23 707 aaKnown RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 TMED9Q9BVK6 235 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 TCEAL2Q9H3H9 227 aaPredicted RBP14.1□□□□□ -0.15
USP47-207ENST00000527733 ERVK-18Q9QC07 812 aa14.1□□□□□ -0.15
USP47-207ENST00000527733 FAM227AF5H4B4 570 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 SLC1A7O00341 560 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 PAPLNO95428 1278 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 CYB5AP00167 134 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 KCNJ5P48544 419 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 PRPS1P60891 318 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 QPRTQ15274 297 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 LEXMQ3ZCV2 418 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 COX20Q5RI15 118 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 IDNKQ5T6J7 187 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 MFSD12Q6NUT3 480 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 TMEM64Q6YI46 380 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 OR52E2Q8NGJ4 325 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 CD300AQ9UGN4 299 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 LOC105369274A0A096LPK9 316 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 PRAMEF33A0A0G2JMD5 474 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 LOC102723532A0A0G2JNH3 316 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 AGAP14A8MT82 685 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ACOT8O14734 319 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 SEC14L5O43304 696 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 GALR3O60755 368 aaPredicted RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 PIAS2O75928 621 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 DNAJB5O75953 348 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 NSA2O95478 260 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 FUT1P19526 365 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 GAS6Q14393 721 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 IHHQ14623 411 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 MRPL2Q5T653 305 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 ZNF547Q8IVP9 402 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 OR4N4Q8N0Y3 316 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ACBD7Q8N6N7 88 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ZNF675Q8TD23 568 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 NUDT8Q8WV74 236 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 MCUBQ9NWR8 336 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 TAS2R10Q9NYW0 307 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 COMMD3Q9UBI1 195 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 SEC14L4Q9UDX3 406 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 IL20RAQ9UHF4 553 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 VDAC3Q9Y277 283 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 SPARCP09486 303 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ZNF28P17035 718 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 FAUP35544 74 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 FZD2Q14332 565 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 KCNAB1Q14722 419 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 CHERPQ8IWX8 916 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 OR2T4Q8NH00 348 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 OR4K13Q8NH42 304 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 SENP5Q96HI0 755 aaPredicted RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 SACM1LQ9NTJ5 587 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 POMT2Q9UKY4 750 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 HEMK1Q9Y5R4 338 aaPredicted RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 A0A1W2PPC1 479 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 EIF1AYO14602 144 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 ANKRD28O15084 1053 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 STSP08842 583 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 CELP19835 753 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 C4BPBP20851 252 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 FUT4P22083 530 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ZNF84P51523 738 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 POU4F2Q12837 409 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ENTPD8Q5MY95 495 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 GTF2IRD2BQ6EKJ0 949 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 KIAA0907Q7Z7F0 614 aaPredicted RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 GTF2IRD2Q86UP8 949 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ERI1Q8IV48 349 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 CHST4Q8NCG5 386 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 THAP4Q8WY91 577 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 ZNF696Q9H7X3 374 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 FOLH1BQ9HBA9 442 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 A4GALTQ9NPC4 353 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 TESQ9UGI8 421 aaKnown RBP14.09□□□□□ -0.15
USP47-207ENST00000527733 ST14Q9Y5Y6 855 aa14.09□□□□□ -0.15
USP47-207ENST00000527733 A0A1W2PPL8 197 aa14.08□□□□□ -0.16
USP47-207ENST00000527733 GJE1A6NN92 205 aa14.08□□□□□ -0.16
USP47-207ENST00000527733 CCRL2O00421 344 aa14.08□□□□□ -0.16
USP47-207ENST00000527733 ETHE1O95571 254 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms