RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RGS14O43566 566 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 PSMG1O95456 288 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 UGT2B10P36537 528 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 DNAJB13P59910 316 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 FGFBP1Q14512 234 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 VPS26BQ4G0F5 336 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 SHEQ5VZ18 495 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 CLEC6AQ6EIG7 209 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 ANKRD26P1Q6NSI1 321 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 Q71RC1 249 aaPredicted RBP20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 BIVMQ86UB2 503 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 EXOC3L1Q86VI1 746 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 CEP70Q8NHQ1 597 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 SLC9A6Q92581 669 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 C18orf12Q96KH6 178 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 RNF122Q9H9V4 155 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 LRTM1Q9HBL6 345 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 TNFRSF12AQ9NP84 129 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 OXSMQ9NWU1 459 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 C1orf109Q9NX04 203 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 SH3BP4Q9P0V3 963 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 PROCRQ9UNN8 238 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 VDAC3Q9Y277 283 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 ZNF175Q9Y473 711 aa20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 FLNAP21333 2647 aaKnown RBP20.15■□□□□ 0.82
TRAPPC4-208ENST00000527680 SHISA8B8ZZ34 492 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 AKAP10O43572 662 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 PLIN3O60664 434 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 MANFP55145 182 aaKnown RBP20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 PRR5P85299 388 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 GRAMD1BQ3KR37 738 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 ANKRD34AQ69YU3 496 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 ZNF550Q7Z398 422 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 GALNT10Q86SR1 603 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 ZFP28Q8NHY6 868 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 UBLCP1Q8WVY7 318 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 PIGTQ969N2 578 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 CIDECQ96AQ7 238 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 METTL2AQ96IZ6 378 aaKnown RBP20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 SMR3AQ99954 134 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 TXLNGYQ9BZA5 131 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 KLHL4Q9C0H6 718 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 C12orf65Q9H3J6 166 aaKnown RBP20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 ZNF395Q9H8N7 513 aaPredicted RBP20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 UBTD1Q9HAC8 227 aa20.14■□□□□ 0.81
TRAPPC4-208ENST00000527680 COPEO14579 308 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 EIF1AYO14602 144 aaKnown RBP20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 NDUFB5O43674 189 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 SMPD2O60906 423 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 PLGP00747 810 aaPredicted RBP20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 IGKV1D-16P01601 117 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 INHBBP09529 407 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 CRHR1P34998 444 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 EIF1AXP47813 144 aaKnown RBP20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 PCYT1AP49585 367 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 KIAA0040Q15053 153 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 EXOC3L2Q2M3D2 409 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 APOOLQ6UXV4 268 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 GSPT2Q8IYD1 628 aaKnown RBP20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 NUP43Q8NFH3 380 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 PPCDCQ96CD2 204 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 CCL27Q9Y4X3 112 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 PTGDR2Q9Y5Y4 395 aa20.13■□□□□ 0.81
TRAPPC4-208ENST00000527680 CGAP01215 116 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 SHBGP04278 402 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 CD8BP10966 210 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 FCGR2AP12318 317 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 HPGDP15428 266 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 TBXA2RP21731 343 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 LTBQ06643 244 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 LIPMQ5VYY2 423 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 SH2D5Q6ZV89 423 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 FAM214BQ7L5A3 538 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 CDRT4Q8N9R6 151 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 ZBED6CLQ96FA7 236 aaPredicted RBP20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 TSSK3Q96PN8 268 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 REEP4Q9H6H4 257 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 HHATLQ9HCP6 504 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 BAIAP2L1Q9UHR4 511 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 ARID1AO14497 2285 aa20.12■□□□□ 0.81
TRAPPC4-208ENST00000527680 DEFB108AA8MXU0 73 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 AZIN1O14977 448 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 AQP8O94778 261 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 CHEK2O96017 543 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 OPN1LWP04000 364 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 IFI6P09912 130 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 LINC00032P0C843 101 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 FPR1P21462 350 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 CRYGSP22914 178 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 CTBP2P56545 445 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 ACKR1Q16570 336 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 FIGNL1Q6PIW4 674 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 CXorf67Q86X51 503 aaPredicted RBP20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 WDR75Q8IWA0 830 aaKnown RBP20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 METTL25Q8N6Q8 603 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 GATSQ8NAP1 163 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 OR4C3Q8NH37 302 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 CLHC1Q8NHS4 586 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 FBXO30Q8TB52 745 aa20.11■□□□□ 0.81
TRAPPC4-208ENST00000527680 EMC9Q9Y3B6 208 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms