RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 BBS1Q8NFJ9 593 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 OR51G2Q8NGK0 314 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 FGF11Q92914 225 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 RFT1Q96AA3 541 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 DTD2Q96FN9 168 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 KCNJ15Q99712 375 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 SMAD5Q99717 465 aaKnown RBP11.71□□□□□ -0.54
CAPN1-208ENST00000527323 C17orf62Q9BQA9 187 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 EPHX3Q9H6B9 360 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 CD93Q9NPY3 652 aa11.71□□□□□ -0.54
CAPN1-208ENST00000527323 NFKBIL1Q9UBC1 381 aaPredicted RBP11.71□□□□□ -0.54
CAPN1-208ENST00000527323 A0A0A6YYJ9 748 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 CXorf51AA0A1B0GTR3 108 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 FAM183AA6NL82 134 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 NDUFS4O43181 175 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 EEF1E1O43324 174 aaKnown RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 LANCL1O43813 399 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 EPPINO95925 133 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 C8orf89P0DMQ9 161 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 NTSP30990 170 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 GPR4P46093 362 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 CCR8P51685 355 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 NDUFAF5Q5TEU4 345 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 CCDC116Q8IYX3 515 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ARIH2OSQ8N7S6 290 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 SAMD12Q8N8I0 201 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 C7orf57Q8NEG2 295 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 DNAJA4Q8WW22 397 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 C16orf58Q96GQ5 468 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 AMDHD1Q96NU7 426 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ACSS1Q9NUB1 689 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 IMP3Q9NV31 184 aaKnown RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 CLEC4AQ9UMR7 237 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 KDM4EB2RXH2 506 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 GTPBP1O00178 669 aaKnown RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 LILRB5O75023 590 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 SLC2A10O95528 541 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 HMGN2P05204 90 aaKnown RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 POU3F3P20264 500 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 FCARP24071 287 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ANXA11P50995 505 aaKnown RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 SRP54P61011 504 aaKnown RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF155Q12901 538 aaPredicted RBP11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF750Q32MQ0 723 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 FAM46CQ5VWP2 391 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ZNF547Q8IVP9 402 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 NRSN1Q8IZ57 195 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 SUN3Q8TAQ9 357 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 NUS1Q96E22 293 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 CAMK1GQ96NX5 476 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 ATP13A2Q9NQ11 1180 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 SLC35C2Q9NQQ7 365 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 DEC1Q9P2X7 70 aa11.7□□□□□ -0.54
CAPN1-208ENST00000527323 LEUTXA8MZ59 168 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 PAICSP22234 425 aaKnown RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 ACADLP28330 430 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 GNA13Q14344 377 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 C9orf64Q5T6V5 341 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 RASSF6Q6ZTQ3 369 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 JAZF1Q86VZ6 243 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 VRK2Q86Y07 508 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 CPOQ8IVL8 374 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 SLC38A6Q8IZM9 456 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 TTC9Q92623 222 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 OSTF1Q92882 214 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 ZG16BQ96DA0 208 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 TRMT61BQ9BVS5 477 aaKnown RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 ISG20L2Q9H9L3 353 aaKnown RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 SEMA4GQ9NTN9 838 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 NUDT15Q9NV35 164 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 POLHQ9Y253 713 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 MRPS7Q9Y2R9 242 aaKnown RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 ASB4Q9Y574 426 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 KCNE3Q9Y6H6 103 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 BDP1A6H8Y1 2624 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 SOCS6O14544 535 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 NARSO43776 548 aaKnown RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 TBX19O60806 448 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 CFL1P23528 166 aaKnown RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 GJA4P35212 333 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 SLC16A1P53985 500 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 ST3GAL3Q11203 375 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 NTRK2Q16620 822 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 TMEM91Q6ZNR0 172 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 LUZP2Q86TE4 346 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 LSRQ86X29 649 aaPredicted RBP11.69□□□□□ -0.54
CAPN1-208ENST00000527323 C9orf62Q8N4C0 152 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 POGLUT1Q8NBL1 392 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 OR4Q3Q8NH05 313 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 MACROD1Q9BQ69 325 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 KCNN2Q9H2S1 579 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 RHBGQ9H310 441 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 DPEP2Q9H4A9 486 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 ASB6Q9NWX5 421 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 UCKL1Q9NWZ5 548 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 B3GNT2Q9NY97 397 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 NTNG1Q9Y2I2 539 aa11.69□□□□□ -0.54
CAPN1-208ENST00000527323 WDFY3Q8IZQ1 3526 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 LAMP2P13473 410 aa11.68□□□□□ -0.54
CAPN1-208ENST00000527323 STOMP27105 288 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms