RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 A8MXE2 369 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 EMC8O43402 210 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 AKAP10O43572 662 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 LYPLA1O75608 230 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 UTS2O95399 124 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 CHRNGP07510 517 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 HK1P19367 917 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 AGFG1P52594 562 aaKnown RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 VSNL1P62760 191 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 FOXF2Q12947 444 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 SNTB1Q13884 538 aaKnown RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 GALNTL6Q49A17 601 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 MARCH3Q86UD3 253 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 GRAMD2AQ8IUY3 354 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 DDIASQ8IXT1 998 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 OR6Y1Q8NGX8 325 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 FAM110BQ8TC76 370 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 AENQ8WTP8 325 aaKnown RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 CIDECQ96AQ7 238 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 INTS12Q96CB8 462 aaKnown RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 C1GALT1C1Q96EU7 318 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 GIMAP5Q96F15 307 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 DACH2Q96NX9 599 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 MS4A4EQ96PG1 132 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 GPATCH1Q9BRR8 931 aaKnown RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 RBM24Q9BX46 236 aaKnown RBP12.11□□□□□ -0.47
CAPN1-207ENST00000527189 GIN1Q9NXP7 522 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 SLC17A7Q9P2U7 560 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 ATP6V1HQ9UI12 483 aa12.11□□□□□ -0.47
CAPN1-207ENST00000527189 KIAA1549Q9HCM3 1950 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ALG1L2C9J202 215 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 MSTNO14793 375 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 PIP5K1BO14986 540 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ANGPTL1O95841 491 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 TBXA2RP21731 343 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 HPCAL1P37235 193 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 SERPINB4P48594 390 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 PRIM2P49643 509 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ART1P52961 327 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 PRKAG1P54619 331 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ATP6AP1LQ52LC2 224 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ZNF385BQ569K4 471 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 XKR7Q5GH72 579 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 RAET1LQ5VY80 246 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ANKRD26P1Q6NSI1 321 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 P4HA3Q7Z4N8 544 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 PIK3R3Q92569 461 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 SLC9A6Q92581 669 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 RMND5BQ96G75 393 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-207ENST00000527189 PRPF18Q99633 342 aaKnown RBP12.1□□□□□ -0.47
CAPN1-207ENST00000527189 FOXC2Q99958 501 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 MECRQ9BV79 373 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 RTN4RQ9BZR6 473 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 CXXC4Q9H2H0 198 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 EQTNQ9NQ60 294 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 FLRT3Q9NZU0 649 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ST6GALNAC2Q9UJ37 374 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 PACSIN3Q9UKS6 424 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ZNF337Q9Y3M9 751 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 ZNF175Q9Y473 711 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 AP4B1Q9Y6B7 739 aa12.1□□□□□ -0.47
CAPN1-207ENST00000527189 MPDZO75970 2070 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 A0A087WZY1 265 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 GXYLT2A0PJZ3 443 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 OR2M5A3KFT3 312 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 SLC22A20A6NK97 555 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 SPAG7O75391 227 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 TNFSF13O75888 250 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 KCNK2O95069 426 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 TGM6O95932 706 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 IGKV1D-16P01601 117 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 BPGMP07738 259 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 ALOX5P09917 674 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 CPA2P48052 419 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 RFX3P48380 749 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 IST1P53990 364 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 RPS3AP61247 264 aaKnown RBP12.09□□□□□ -0.47
CAPN1-207ENST00000527189 STX5Q13190 355 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 FGFBP1Q14512 234 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 TMEM44Q2T9K0 475 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 GRAMD1BQ3KR37 738 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 EXOSC6Q5RKV6 272 aaKnown RBP12.09□□□□□ -0.47
CAPN1-207ENST00000527189 C6orf136Q5SQH8 315 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 APOOLQ6UXV4 268 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 CDC20BQ86Y33 519 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 MISPQ8IVT2 679 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 MREGQ8N565 214 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 SLC16A11Q8NCK7 471 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 OR4C3Q8NH37 302 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 CLHC1Q8NHS4 586 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 PSMA8Q8TAA3 256 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 ZIM3Q96PE6 472 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 STACQ99469 402 aa12.09□□□□□ -0.47
CAPN1-207ENST00000527189 VIPAS39Q9H9C1 493 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms