RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 PEX5LQ8IYB4 626 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 TCTE3Q8IZS6 198 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 C12orf76Q8N812 135 aaPredicted RBP10.88□□□□□ -0.67
LINC01001-201ENST00000526704 DUSP18Q8NEJ0 188 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 SMG7Q92540 1137 aaKnown RBP10.88□□□□□ -0.67
LINC01001-201ENST00000526704 UPRTQ96BW1 309 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CHFRQ96EP1 664 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 ASB16Q96NS5 453 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 SARGQ9BW04 601 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 ASB6Q9NWX5 421 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 KLHL28Q9NXS3 571 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 ZFR2Q9UPR6 939 aaKnown RBP10.88□□□□□ -0.67
LINC01001-201ENST00000526704 LYRM1O43325 122 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 OR5F1O95221 314 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CHRNB1P11230 501 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CLDN2P57739 230 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 SNRPNP63162 240 aaKnown RBP10.88□□□□□ -0.67
LINC01001-201ENST00000526704 EFR3AQ14156 821 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 AGERQ15109 404 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 SNAP47Q5SQN1 464 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 ZNF836Q6ZNA1 936 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 TRILQ7L0X0 811 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 DGLUCYQ7Z3D6 616 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 NR2C2APQ86WQ0 139 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 NRROSQ86YC3 692 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CPOQ8IVL8 374 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 MFSD9Q8NBP5 474 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 SLC16A11Q8NCK7 471 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 OR2T33Q8NG76 320 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 OR7G2Q8NG99 324 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 GANCQ8TET4 914 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 JPH3Q8WXH2 748 aaPredicted RBP10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CDS1Q92903 461 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 SAMD8Q96LT4 415 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 KCNJ15Q99712 375 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 ISG20L2Q9H9L3 353 aaKnown RBP10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CLCA3PQ9Y6N3 262 aa10.88□□□□□ -0.67
LINC01001-201ENST00000526704 CENPVL1A0A0U1RR11 272 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 FAM183AA6NL82 134 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ASGR2P07307 311 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ZGLP1P0C6A0 271 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 PRKAR1AP10644 381 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 IFNA8P32881 189 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 TSFMP43897 325 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 GCGRP47871 477 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CLDN20P56880 219 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ABATP80404 500 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 LRRC32Q14392 662 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 KRT33BQ14525 404 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CST6Q15828 149 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 FAM214AQ32MH5 1076 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 PUS10Q3MIT2 529 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 MFSD12Q6NUT3 480 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 MZT2BQ6NZ67 158 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 B3GLCTQ6Y288 498 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CXXC5Q7LFL8 322 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 YIPF7Q8N8F6 280 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ADAMTS15Q8TE58 950 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ZFPM2Q8WW38 1151 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 C10orf90Q96M02 699 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 TEX12Q9BXU0 123 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 PHPT1Q9NRX4 125 aaPredicted RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ACOXLQ9NUZ1 547 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 NLKQ9UBE8 527 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 TNFRSF10DQ9UBN6 386 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 PRKAG2Q9UGJ0 569 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 KLHL21Q9UJP4 597 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 SLC7A7Q9UM01 511 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ZNF780BQ9Y6R6 833 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 SGK494L7N484 410 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 RNF13O43567 381 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 NARSO43776 548 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 PAK4O96013 591 aaPredicted RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CEACAM5P06731 702 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 POU2F2P09086 479 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 NDUFV2P19404 249 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CFL1P23528 166 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 TEAD1P28347 426 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 WASP42768 502 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CTBP2P56545 445 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ZNF425Q6IV72 752 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 MZT2AQ6P582 158 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 SMARCD3Q6STE5 483 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 LIX1LQ8IVB5 337 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 OR51G2Q8NGK0 314 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 CLIP3Q96DZ5 547 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 PAWRQ96IZ0 340 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 MS4A4EQ96PG1 132 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 FCRL4Q96PJ5 515 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 TIMP4Q99727 224 aa10.87□□□□□ -0.67
LINC01001-201ENST00000526704 LYARQ9NX58 379 aaKnown RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 SIRT4Q9Y6E7 314 aaPredicted RBP10.87□□□□□ -0.67
LINC01001-201ENST00000526704 ZC3H12DA2A288 527 aaKnown RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 OR6C70A6NIJ9 312 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 GTPBP1O00178 669 aaKnown RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 SCAMP1O15126 338 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 TRIM3O75382 744 aaPredicted RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 RGS9O75916 674 aaPredicted RBP10.86□□□□□ -0.67
LINC01001-201ENST00000526704 ELK1P19419 428 aa10.86□□□□□ -0.67
LINC01001-201ENST00000526704 ZNF136P52737 540 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms