RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 EVI2BP34910 448 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 PCGF2P35227 344 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 TNFSF10P50591 281 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 PSPHP78330 225 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 CEACAM7Q14002 265 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 ZNF630Q2M218 657 aaPredicted RBP12.58□□□□□ -0.4
CD44-224ENST00000526669 VMACQ2NL98 169 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 ZNF766Q5HY98 468 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 PDZK1Q5T2W1 519 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 SLC22A10Q63ZE4 541 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 REEP3Q6NUK4 255 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 GPALPP1Q8IXQ4 340 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 HIPK4Q8NE63 616 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 GRHL3Q8TE85 626 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 ZG16BQ96DA0 208 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 REXO5Q96IC2 774 aaKnown RBP12.58□□□□□ -0.4
CD44-224ENST00000526669 C5orf34Q96MH7 638 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 BTBD10Q9BSF8 475 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 THTPAQ9BU02 230 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 SPATA9Q9BWV2 254 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 ADNPQ9H2P0 1102 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 METTL7AQ9H8H3 244 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 GALNT9Q9HCQ5 603 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 LUZP4Q9P127 313 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 EGFL7Q9UHF1 273 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 KCNE5Q9UJ90 142 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 CNOT11Q9UKZ1 510 aaKnown RBP12.58□□□□□ -0.4
CD44-224ENST00000526669 AP3M1Q9Y2T2 418 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 PCDHGB7Q9Y5F8 929 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 PCDHGA10Q9Y5H3 936 aa12.58□□□□□ -0.4
CD44-224ENST00000526669 PRRC2CQ9Y520 2896 aaKnown RBP12.57□□□□□ -0.4
CD44-224ENST00000526669 ELOVL7A1L3X0 281 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 GSTA4O15217 222 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 ATP5HO75947 161 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 OPN1SWP03999 348 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 P04436 131 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 NCK1P16333 377 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 PTGDSP41222 190 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 ATP12AP54707 1039 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 RBBP4Q09028 425 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 MAPK14Q16539 360 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 DNAL1Q4LDG9 190 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 SAMD4BQ5PRF9 694 aaKnown RBP12.57□□□□□ -0.4
CD44-224ENST00000526669 SLC25A25Q6KCM7 469 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 APOOLQ6UXV4 268 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 GALNTL5Q7Z4T8 443 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 MARCH3Q86UD3 253 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 VRK2Q86Y07 508 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 DND1Q8IYX4 353 aaKnown RBP12.57□□□□□ -0.4
CD44-224ENST00000526669 FBXW8Q8N3Y1 598 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 OR4C3Q8NH37 302 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 BBS10Q8TAM1 723 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 PAQR8Q8TEZ7 354 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 TMCO6Q96DC7 493 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 TREX2Q9BQ50 279 aaPredicted RBP12.57□□□□□ -0.4
CD44-224ENST00000526669 OSBPL11Q9BXB4 747 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 RTN4RQ9BZR6 473 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 C1orf21Q9H246 121 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 TRIM45Q9H8W5 580 aaPredicted RBP12.57□□□□□ -0.4
CD44-224ENST00000526669 SH2D2AQ9NP31 389 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 SACM1LQ9NTJ5 587 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 DEPPQ9NTK1 212 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 CALML5Q9NZT1 146 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 HRH3Q9Y5N1 445 aa12.57□□□□□ -0.4
CD44-224ENST00000526669 ZFYVE26Q68DK2 2539 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 IGSF10Q6WRI0 2623 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 A0A0G2JPF8 293 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 PINLYPA6NC86 204 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 HNRNPCL2B2RXH8 293 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 HNRNPCL3B7ZW38 293 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 ERVH48-1M5A8F1 160 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 SCDO00767 359 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 GNB5O14775 395 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 GMFGO60234 142 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 FADS1O60427 444 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 DPM1O60762 260 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 HNRNPCL1O60812 293 aaKnown RBP12.56□□□□□ -0.4
CD44-224ENST00000526669 UGT2B17O75795 530 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 PGM3O95394 542 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 SP1P08047 785 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 HNRNPCL4P0DMR1 293 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 HPGDP15428 266 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 CD46P15529 392 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 RFC3P40938 356 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 CASP3P42574 277 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 RPP38P78345 283 aaKnown RBP12.56□□□□□ -0.4
CD44-224ENST00000526669 PMP22Q01453 160 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 GNA13Q14344 377 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 INPP5JQ15735 1006 aaPredicted RBP12.56□□□□□ -0.4
CD44-224ENST00000526669 NDUFAF6Q330K2 333 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 NADK2Q4G0N4 442 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 LRRC23Q53EV4 343 aaPredicted RBP12.56□□□□□ -0.4
CD44-224ENST00000526669 ERICH5Q6P6B1 374 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 PCSK4Q6UW60 755 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 IGFL3Q6UXB1 125 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 GOLM1Q8NBJ4 401 aa12.56□□□□□ -0.4
CD44-224ENST00000526669 POGLUT1Q8NBL1 392 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms