RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 DND1Q8IYX4 353 aaKnown RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 AMER3Q8N944 861 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 STKLD1Q8NE28 680 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 SPPL2BQ8TCT7 592 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 SPPL2AQ8TCT8 520 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 MIPOL1Q8TD10 442 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 C2orf15Q8WU43 125 aaKnown RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 CHPT1Q8WUD6 406 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 CFAP36Q96G28 342 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 PCED1BQ96HM7 432 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 LURAP1Q96LR2 239 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 PANX3Q96QZ0 392 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 GAL3ST4Q96RP7 486 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 RASL10BQ96S79 203 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ACBD6Q9BR61 282 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 CHCHD5Q9BSY4 110 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 STRADBQ9C0K7 418 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ELOVL4Q9GZR5 314 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ZNF350Q9GZX5 532 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 HSD3B7Q9H2F3 369 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 THAP9Q9H5L6 903 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 SUDS3Q9H7L9 328 aaPredicted RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 PLEKHA3Q9HB20 300 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 SAMSN1Q9NSI8 373 aaKnown RBP3.2□□□□□ -1.9
CD44-219ENST00000525685 ANO10Q9NW15 660 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 RAB20Q9NX57 234 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 GCNT4Q9P109 453 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 CDH9Q9ULB4 789 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 ZNF510Q9Y2H8 683 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 COQ4Q9Y3A0 265 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 LAMA3Q16787 3333 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 MYO16Q9Y6X6 1858 aa3.2□□□□□ -1.9
CD44-219ENST00000525685 COL4A2P08572 1712 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 A0A087X0K7 114 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 A0A1B0GVY2 172 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SMIM30A4D0T7 59 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 GTPBP10A4D1E9 387 aaKnown RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 A8MXQ7 604 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 LOC730098B7Z3J9 87 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 LMO7DNF2Z398 122 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CACNB4O00305 520 aaPredicted RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 CLDN5O00501 218 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CHUKO15111 745 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ZNF749O43361 778 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 NME6O75414 186 aaPredicted RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 NOL4O94818 638 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 UROSP10746 265 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 P4HA1P13674 534 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CCDC130P13994 396 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 FERP16591 822 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ZNF18P17022 549 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CYP2F1P24903 491 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ADORA2BP29275 332 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CASQ1P31415 396 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CCR2P41597 374 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 RIDAP52758 137 aaKnown RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 KCNK10P57789 538 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 KRT83P78385 493 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 MYL5Q02045 173 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SMARCB1Q12824 385 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CUL2Q13617 745 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SLC1A5Q15758 541 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CFAP221Q4G0U5 840 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SDHAF4Q5VUM1 108 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 PAQR9Q6ZVX9 377 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 APTXQ7Z2E3 356 aaKnown RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 ACOT1Q86TX2 421 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ZSCAN30Q86W11 494 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 UNC93AQ86WB7 457 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SIAH3Q8IW03 269 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 MAPK1IP1LQ8NDC0 245 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ITFG1Q8TB96 612 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SLC2A14Q8TDB8 520 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 GPR148Q8TDV2 347 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 RASL10AQ92737 203 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 GGHQ92820 318 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 PSMG2Q969U7 264 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 SNRNP40Q96DI7 357 aaKnown RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 TCEAL4Q96EI5 215 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 RPGRIP1Q96KN7 1286 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 TNFRSF13CQ96RJ3 184 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 BPIFA3Q9BQP9 254 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 TUBGCP2Q9BSJ2 902 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CACNG6Q9BXT2 260 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ZNF665Q9H7R5 613 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CYP3A43Q9HB55 503 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CISHQ9NSE2 258 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 FAM49BQ9NUQ9 324 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 MED17Q9NVC6 651 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 PLEK2Q9NYT0 353 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 CNIH4Q9P003 139 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 PAK5Q9P286 719 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 FBXW2Q9UKT8 454 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 MGAT4AQ9UM21 535 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 ERVK-19Q9WJR5 959 aa3.19□□□□□ -1.9
CD44-219ENST00000525685 NUP210Q8TEM1 1887 aaPredicted RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 KIF26AQ9ULI4 1882 aaPredicted RBP3.19□□□□□ -1.9
CD44-219ENST00000525685 IGKV3D-20A0A0C4DH25 116 aa3.18□□□□□ -1.9
CD44-219ENST00000525685 A0A1W2PRV1 198 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms