RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 RNF149Q8NC42 400 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CLEC18CQ8NCF0 446 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 OR1L6Q8NGR2 347 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 NUBPLQ8TB37 319 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 TEX47Q8TBZ9 253 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SORCS1Q8WY21 1168 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 TAAR8Q969N4 342 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SLC35B4Q969S0 331 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MYLPFQ96A32 169 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SCRN2Q96FV2 425 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 BOD1Q96IK1 185 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 C9orf72Q96LT7 481 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SLC38A2Q96QD8 506 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MCRIP2Q9BUT9 160 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 SEMA6AQ9H2E6 1030 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 SLC38A1Q9H2H9 487 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 RIMS4Q9H426 269 aaPredicted RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 RHOJQ9H4E5 214 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 EGLN3Q9H6Z9 239 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 RAVER2Q9HCJ3 691 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 ZNF701Q9NV72 531 aaPredicted RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 ASB6Q9NWX5 421 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 CLN8Q9UBY8 286 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 MRM2Q9UI43 246 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 MRTO4Q9UKD2 239 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 ZFR2Q9UPR6 939 aaKnown RBP4.07□□□□□ -1.76
CD44-213ENST00000525209 URGCP-MRPS24S4R325 110 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 UBR1Q8IWV7 1749 aa4.07□□□□□ -1.76
CD44-213ENST00000525209 INO80Q9ULG1 1556 aaPredicted RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 GPATCH8Q9UKJ3 1502 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 LRRC9Q6ZRR7 1453 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 FAM135BQ49AJ0 1406 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TRGV11A0A075B6L2 103 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TMEM213A2RRL7 107 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 GOLGA6L4A6NEF3 574 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 YJEFN3A6XGL0 299 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 GOLGA6L19H0YKK7 550 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 SMLR1H3BR10 107 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 HSPB6O14558 160 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 RFXANKO14593 260 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 SIVA1O15304 175 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 EMC8O43402 210 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CNOT3O75175 753 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 CIAO1O76071 339 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 STK17BO94768 372 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 NXPH3O95157 252 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CLDN9O95484 217 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 EML2O95834 649 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 FADS2O95864 444 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 GAPDHP04406 335 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 IL6P05231 212 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 KRT7P08729 469 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CD3GP09693 182 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CTXN2P0C2S0 81 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CYP2D6P10635 497 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 MAGP20916 626 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 ACTR1BP42025 376 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TMPOP42166 694 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 SLC1A4P43007 532 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 OR3A3P47888 321 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TGM4P49221 684 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 DUSP3P51452 185 aaPredicted RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 PSMD7P51665 324 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CEBPGP53567 150 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 ERVK-25P63136 954 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 GHRHRQ02643 423 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 PTPN20Q4JDL3 420 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 XKR6Q5GH73 641 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 GPR107Q5VW38 600 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 RTL6Q6ICC9 239 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 DUS1LQ6P1R4 473 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 ULK3Q6PHR2 472 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CWC27Q6UX04 472 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 DLK2Q6UY11 383 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 GCNT7Q6ZNI0 430 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 ZNF367Q7RTV3 350 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 DEFB132Q7Z7B7 95 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 ACOT1Q86TX2 421 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 RANBP3LQ86VV4 465 aaPredicted RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 TRIM69Q86WT6 500 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 ZNF34Q8IZ26 560 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 MCOLN2Q8IZK6 566 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 LIX1Q8N485 282 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 KLHL36Q8N4N3 616 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 LRRC75AQ8NAA5 344 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 POC1AQ8NBT0 407 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 PIH1D2Q8WWB5 315 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 FAM131CQ96AQ9 280 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 TMEM19Q96HH6 336 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 OPALINQ96PE5 141 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 CSPG4P5Q96PW8 444 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 AGPAT1Q99943 283 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 SH3GL3Q99963 347 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 SPATA25Q9BR10 227 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 SH2D3AQ9BRG2 576 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 ALG8Q9BVK2 526 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 UPF3AQ9H1J1 476 aaKnown RBP4.06□□□□□ -1.76
CD44-213ENST00000525209 SLC6A17Q9H1V8 727 aa4.06□□□□□ -1.76
CD44-213ENST00000525209 IL17RBQ9NRM6 502 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms