RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 GABRA3P34903 492 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 ART1P52961 327 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 MANFP55145 182 aaKnown RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 PRR5P85299 388 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 MLC1Q15049 377 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 DUSP5Q16690 384 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 GRAMD1BQ3KR37 738 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 WDR93Q6P2C0 686 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 APOOLQ6UXV4 268 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 R3HCC1LQ7Z5L2 792 aaKnown RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 LUZP2Q86TE4 346 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 MARCH3Q86UD3 253 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 UBQLNLQ8IYU4 475 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 NUP43Q8NFH3 380 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 CEP70Q8NHQ1 597 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 GPR151Q8TDV0 419 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 CAVIN3Q969G5 261 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 PPP3R2Q96LZ3 170 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 RBM24Q9BX46 236 aaKnown RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 ROPN1BQ9BZX4 212 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 PIGMQ9H3S5 423 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 PTGES2Q9H7Z7 377 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 ROPN1Q9HAT0 212 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 EML4Q9HC35 981 aaKnown RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 GIMAP2Q9UG22 337 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 BAIAP2L1Q9UHR4 511 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 ATP6V1HQ9UI12 483 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 ST6GALNAC2Q9UJ37 374 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 PACSIN3Q9UKS6 424 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 TRAF6Q9Y4K3 522 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 NUP214P35658 2090 aaPredicted RBP8.53□□□□□ -1.04
SF3B2-204ENST00000525207 MTORP42345 2549 aa8.53□□□□□ -1.04
SF3B2-204ENST00000525207 SLC22A20A6NK97 555 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 H0YC42 278 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 H3BML4 177 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 LINC01387J3KSC0 135 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 SEC14L5O43304 696 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 EMC8O43402 210 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 TYROBPO43914 113 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 KCNK2O95069 426 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CRHP06850 196 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 BPGMP07738 259 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 EPXP11678 715 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CREB1P16220 341 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF17P17021 662 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 DDX5P17844 614 aaKnown RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 EFNA1P20827 205 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CCKARP32238 428 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CPOXP36551 454 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 RPL3P39023 403 aaKnown RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 ETV4P43268 484 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CPA2P48052 419 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CLK3P49761 638 aaKnown RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 IST1P53990 364 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 PRKAG1P54619 331 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 TPD52P55327 224 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CLDN15P56746 228 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 C17orf67Q0P5P2 114 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 PTGR1Q14914 329 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 DAZAP2Q15038 168 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 TMEM44Q2T9K0 475 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 ATP6AP1LQ52LC2 224 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 OR2A2Q6IF42 318 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 PAMR1Q6UXH9 720 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 LRIG3Q6UXM1 1119 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 P4HA3Q7Z4N8 544 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 ZAR1Q86SH2 424 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 GALNT10Q86SR1 603 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 EXOC3L1Q86VI1 746 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CDC20BQ86Y33 519 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 MREGQ8N565 214 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 MEIOBQ8N635 442 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 METTL25Q8N6Q8 603 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 COX18Q8N8Q8 333 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 SLC16A11Q8NCK7 471 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 OR6Y1Q8NGX8 325 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 GOT1L1Q8NHS2 421 aaPredicted RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 SLC9A6Q92581 669 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 JADE3Q92613 823 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 FAM120BQ96EK7 910 aaKnown RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 C3orf30Q96M34 536 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 PIGQQ9BRB3 760 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 C1orf50Q9BV19 199 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 CXXC4Q9H2H0 198 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 NEUROD4Q9HD90 331 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 ZCCHC3Q9NUD5 404 aaKnown RBP8.52□□□□□ -1.05
SF3B2-204ENST00000525207 ZNF175Q9Y473 711 aa8.52□□□□□ -1.05
SF3B2-204ENST00000525207 A8MXE2 369 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 MSTNO14793 375 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 LYPLA1O75608 230 aaPredicted RBP8.51□□□□□ -1.05
SF3B2-204ENST00000525207 ALOX5P09917 674 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 LAMP1P11279 417 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 LCN1P31025 176 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 PRIM2P49643 509 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 SUCLG1P53597 346 aaKnown RBP8.51□□□□□ -1.05
SF3B2-204ENST00000525207 DIO3P55073 304 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 CLDN20P56880 219 aa8.51□□□□□ -1.05
SF3B2-204ENST00000525207 EEF1A1P68104 462 aaKnown RBP8.51□□□□□ -1.05
SF3B2-204ENST00000525207 OCRLQ01968 901 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms