RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RFWD2Q8NHY2 731 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NEIL3Q8TAT5 605 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM57AQ8TBR7 257 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 PNPT1Q8TCS8 783 aaKnown RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 PHOSPHO1Q8TCT1 267 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 MIPOL1Q8TD10 442 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NUDT8Q8WV74 236 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 XAGE5Q8WWM1 108 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 OIT3Q8WWZ8 545 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 RELTQ969Z4 430 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 VPS33AQ96AX1 596 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GIMAP5Q96F15 307 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 SFXN2Q96NB2 322 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 GNRHR2Q96P88 292 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 SCN2AQ99250 2005 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 INPP5KQ9BT40 448 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC6A15Q9H2J7 730 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 POLE3Q9NRF9 147 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 TAS2R10Q9NYW0 307 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 COQ3Q9NZJ6 369 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 CALML5Q9NZT1 146 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 KLHL14Q9P2G3 628 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 P2RX2Q9UBL9 471 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 LEF1Q9UJU2 399 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 TINAGQ9UJW2 476 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 WDR45Q9Y484 360 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF462Q96JM2 2506 aa4.93□□□□□ -1.62
HMGB1P40-201ENST00000525121 NBEAQ8NFP9 2946 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A087WZY1 265 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A096LPI6 279 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1B0GVC2 190 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1W2PP18 115 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 A0A1W2PQD3 144 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 EVPLLA8MZ36 301 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 C5orf58C9J3I9 102 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 E9PLN8 166 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 H0Y3Z8 333 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 LINC01387J3KSC0 135 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 HCRTR2O43614 444 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 GMFGO60234 142 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FADS1O60427 444 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCDC22O60826 627 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 SCN2BO60939 215 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 WDR1O75083 606 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 IGKV1D-16P01601 117 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 SNRPB2P08579 225 aaKnown RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CELA3AP09093 270 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 RFPL3SP0C7P2 107 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR12D1P0DN82 309 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 UBL4AP11441 157 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 UQCRBP14927 111 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 HK1P19367 917 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 POU3F2P20265 443 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ME2P23368 584 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ACVR2AP27037 513 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PTGDSP41222 190 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CCR4P51679 360 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CRISP3P54108 245 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ATP12AP54707 1039 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CASP9P55211 416 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 SUMO3P55854 103 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 EEFSECP57772 596 aaKnown RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 DSTNP60981 165 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PHC1P78364 1004 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FADDQ13158 208 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 NFYCQ13952 458 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 GPR68Q15743 365 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 C3AR1Q16581 482 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ARHGAP11BQ3KRB8 267 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 MMEL1Q495T6 779 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 WIPI1Q5MNZ9 446 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 C1orf185Q5T7R7 199 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 DESI1Q6ICB0 168 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR5M10Q6IEU7 315 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 SLC2A7Q6PXP3 512 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 EIF3MQ7L2H7 374 aaKnown RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CPLX4Q7Z7G2 160 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 YRDCQ86U90 279 aaKnown RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 MARCH3Q86UD3 253 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PEX5LQ8IYB4 626 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ZNF619Q8N2I2 560 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 MEIOBQ8N635 442 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 GATSQ8NAP1 163 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 CHDHQ8NE62 594 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM83FQ8NEG4 500 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 TOR1AIP2Q8NFQ8 470 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR2M3Q8NG83 312 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR5M9Q8NGP3 310 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 OR4C3Q8NH37 302 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 B4GALNT2Q8NHY0 566 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 FAM110BQ8TC76 370 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 DUSP19Q8WTR2 217 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 TSPEARQ8WU66 669 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 PHF10Q8WUB8 498 aaKnown RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 RAB8BQ92930 207 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ABTB1Q969K4 478 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 ROPN1LQ96C74 230 aa4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 SH3YL1Q96HL8 342 aaPredicted RBP4.92□□□□□ -1.62
HMGB1P40-201ENST00000525121 TRNT1Q96Q11 434 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms