RNA–Protein interactions for RNA: ENST00000524627.5

SF3B2-203, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-203ENST00000524627 HMOX2P30519 316 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 RPS4XP62701 263 aaKnown RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 ZNF844Q08AG5 666 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 ZNHIT3Q15649 155 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 PRSS53Q2L4Q9 553 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 CTU2Q2VPK5 515 aaKnown RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 GPRIN3Q6ZVF9 776 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 RAB3IL1Q8TBN0 382 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 METTL6Q8TCB7 284 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 PAFAH2Q99487 392 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 C12orf49Q9H741 205 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 FANCFQ9NPI8 374 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 ZDHHC18Q9NUE0 388 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 DDX18Q9NVP1 670 aaKnown RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 STOML1Q9UBI4 398 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 MRTO4Q9UKD2 239 aaKnown RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 MCTS1Q9ULC4 181 aaKnown RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 NFU1Q9UMS0 254 aa11.4□□□□□ -0.58
SF3B2-203ENST00000524627 C19orf53Q9UNZ5 99 aaPredicted RBP11.4□□□□□ -0.58
SF3B2-203ENST00000524627 MYO1GB0I1T2 1018 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TRIM49D1C9J1S8 452 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 UPK1AO00322 258 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 CLOCKO15516 846 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 CXCL13O43927 109 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 SYNGR4O95473 234 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TP53P04637 393 aaPredicted RBP11.39□□□□□ -0.59
SF3B2-203ENST00000524627 CR1P17927 2039 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 DDCP20711 480 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 SERPINB9P50453 376 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 PSMD4P55036 377 aaKnown RBP11.39□□□□□ -0.59
SF3B2-203ENST00000524627 C17orf67Q0P5P2 114 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 C2orf80Q0P641 193 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TMEM44Q2T9K0 475 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 GRAMD1BQ3KR37 738 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 UNC50Q53HI1 259 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 APOOLQ6UXV4 268 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 BEND4Q6ZU67 534 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 STK32CQ86UX6 486 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TMEM151AQ8N4L1 468 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 CEP112Q8N8E3 955 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 SLC9A6Q92581 669 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TRMT61AQ96FX7 289 aaKnown RBP11.39□□□□□ -0.59
SF3B2-203ENST00000524627 ZNF382Q96SR6 550 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TACO1Q9BSH4 297 aaKnown RBP11.39□□□□□ -0.59
SF3B2-203ENST00000524627 REG4Q9BYZ8 158 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 GLIPR2Q9H4G4 154 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 PYCARDQ9ULZ3 195 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 GPR52Q9Y2T5 361 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 TIMM22Q9Y584 194 aa11.39□□□□□ -0.59
SF3B2-203ENST00000524627 IGLV3-32A0A0A0MS00 114 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 GXYLT2A0PJZ3 443 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 TNFSF11O14788 317 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 PSMG1O95456 288 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 IGKV1D-16P01601 117 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 SOD3P08294 240 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 ZNF17P17021 662 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 PSMB1P20618 241 aaKnown RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 IL11P20809 199 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 NTSP30990 170 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 GABRA3P34903 492 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 CDKN1AP38936 164 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 PRR5P85299 388 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 ZNF763Q0D2J5 394 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 SPDYAQ5MJ70 313 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 ZNF678Q5SXM1 525 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 GALNT18Q6P9A2 607 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 GALNT10Q86SR1 603 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 WDR75Q8IWA0 830 aaKnown RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 PHC2Q8IXK0 858 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 OR2L13Q8N349 312 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 LILRB1Q8NHL6 650 aaPredicted RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 FBXW5Q969U6 566 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 GTPBP3Q969Y2 492 aaKnown RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 S100PBPQ96BU1 408 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 C11orf24Q96F05 449 aaPredicted RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 ADGRG7Q96K78 797 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 TMEM237Q96Q45 408 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 KCNA7Q96RP8 456 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 NPAS1Q99742 590 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 LMF2Q9BU23 707 aaKnown RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 SHCBP1LQ9BZQ2 653 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 TMEM185BQ9H7F4 350 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 EQTNQ9NQ60 294 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 MIEF1Q9NQG6 463 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 PAQR5Q9NXK6 330 aaPredicted RBP11.38□□□□□ -0.59
SF3B2-203ENST00000524627 RNF115Q9Y4L5 304 aa11.38□□□□□ -0.59
SF3B2-203ENST00000524627 A0A0J9YW62 118 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 OVOL3O00110 214 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 SLITRK5O94991 958 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 KCNH1O95259 989 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 IFNA2P01563 188 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 TUBBP07437 444 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 TAC1P20366 129 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 AGTR1P30556 359 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 IDUAP35475 653 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 ACVR1BP36896 505 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 GSTM5P46439 218 aa11.37□□□□□ -0.59
SF3B2-203ENST00000524627 TSC22D1Q15714 1073 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms