RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 LRRC25Q8N386 305 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TOR1AIP2Q8NFQ8 470 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 NEIL3Q8TAT5 605 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ENKURQ8TC29 256 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 GANCQ8TET4 914 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 DNAJA4Q8WW22 397 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 COL26A1Q96A83 441 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SAMD8Q96LT4 415 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 MS4A4EQ96PG1 132 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 FCRL4Q96PJ5 515 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 JAM3Q9BX67 310 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SLC17A9Q9BYT1 436 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TRPV4Q9HBA0 871 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 HINT3Q9NQE9 182 aaKnown RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ASB6Q9NWX5 421 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 NUFIP1Q9UHK0 495 aaKnown RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SLC7A7Q9UM01 511 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 POLHQ9Y253 713 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3KA0A087X1G2 549 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 A0A1W2PQU0 124 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3FA6NER0 549 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 J3QRE1 110 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 NARSO43776 548 aaKnown RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF888P0CJ79 500 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 MYOGP15173 224 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 PTNP21246 168 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ATP6V1E1P36543 226 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 EVX1P49640 407 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 FZD5Q13467 585 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 QPRTQ15274 297 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TRIQKQ629K1 86 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TBC1D3GQ6DHY5 549 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF322Q6U7Q0 402 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF836Q6ZNA1 936 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 GALNT12Q8IXK2 581 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SIRT6Q8N6T7 355 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ASCC1Q8N9N2 400 aaKnown RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SIMC1Q8NDZ2 872 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 C19orf18Q8NEA5 215 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 OR4E2Q8NGC2 313 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SENP5Q96HI0 755 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 GDF15Q99988 308 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TTYH2Q9BSA4 534 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 APOOQ9BUR5 198 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 RANGRFQ9HD47 186 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 GDE1Q9NZC3 331 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 H2AFY2Q9P0M6 372 aaPredicted RBP10.33□□□□□ -0.76
HDAC9-228ENST00000524023 TNFRSF10DQ9UBN6 386 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 MALT1Q9UDY8 824 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF232Q9UNY5 417 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 WDR45Q9Y484 360 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 PCDHGB7Q9Y5F8 929 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 HEBP2Q9Y5Z4 205 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 SCN2AQ99250 2005 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 UNC80Q8N2C7 3258 aa10.33□□□□□ -0.76
HDAC9-228ENST00000524023 C2orf92A0A1B0GVN3 265 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CD8B2A6NJW9 211 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 A6NL46 340 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 BTN3A3O00478 584 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 AGR2O95994 175 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 APODP05090 189 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CD8BP10966 210 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 PTBP1P26599 531 aaKnown RBP eCLIP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 MLLT3P42568 568 aaPredicted RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 MAP2K3P46734 347 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 GCGRP47871 477 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ZNF136P52737 540 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CLDN2P57739 230 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RPS15AP62244 130 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 TNFRSF17Q02223 184 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RGS1Q08116 209 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 IL18Q14116 193 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ARHGAP11BQ3KRB8 267 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 TMEM91Q6ZNR0 172 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CXXC5Q7LFL8 322 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 AMIGO1Q86WK6 493 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 KLBQ86Z14 1044 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 TRIM48Q8IWZ4 208 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 OR14C36Q8NHC7 312 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 PHOSPHO2Q8TCD6 241 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 LCN9Q8WX39 176 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ZC3HAV1LQ96H79 300 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RNF170Q96K19 258 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 FYTTD1Q96QD9 318 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RNF32Q9H0A6 362 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 UBQLN3Q9H347 655 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 B3GAT2Q9NPZ5 323 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 OR6C2Q9NZP2 312 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 BOLA1Q9Y3E2 137 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 COLEC10Q9Y6Z7 277 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CENPVL1A0A0U1RR11 272 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 FAM183AA6NL82 134 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 ZGLP1P0C6A0 271 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CPN2P22792 545 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 CFL1P23528 166 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 HLA-DMAP28067 261 aa10.32□□□□□ -0.76
HDAC9-228ENST00000524023 MAT2AP31153 395 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RACK1P63244 317 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 EEF1A1P68104 462 aaKnown RBP10.32□□□□□ -0.76
HDAC9-228ENST00000524023 RIN1Q13671 783 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms