RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 SH2D5Q6ZV89 423 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 MARCH3Q86UD3 253 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 SLC22A9Q8IVM8 553 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 OR2L13Q8N349 312 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 LRRN4CLQ8ND94 238 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 GMPPAQ96IJ6 420 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 LMF2Q9BU23 707 aaKnown RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 RTN4RQ9BZR6 473 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 ZNF701Q9NV72 531 aaPredicted RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 TAS2R7Q9NYW3 318 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 WBP11Q9Y2W2 641 aaKnown RBP13.36□□□□□ -0.27
PRKDC-204ENST00000521331 ZANQ9Y493 2812 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 COL6A5A8TX70 2615 aa13.36□□□□□ -0.27
PRKDC-204ENST00000521331 A0A087WUV0 522 aaPredicted RBP13.35□□□□□ -0.27
PRKDC-204ENST00000521331 EIF1AYO14602 144 aaKnown RBP13.35□□□□□ -0.27
PRKDC-204ENST00000521331 KLF4O43474 513 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 DLX3O60479 287 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 SS18L1O75177 396 aaPredicted RBP13.35□□□□□ -0.27
PRKDC-204ENST00000521331 KCNH1O95259 989 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 UTS2O95399 124 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 ANGPTL1O95841 491 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 THBDP07204 575 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 IFI6P09912 130 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 ZNF17P17021 662 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 IL11P20809 199 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 EIF1AXP47813 144 aaKnown RBP13.35□□□□□ -0.27
PRKDC-204ENST00000521331 PRKAA2P54646 552 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 PRR5P85299 388 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 SPDYAQ5MJ70 313 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 PPP4R4Q6NUP7 873 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 STAC2Q6ZMT1 411 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 TIFABQ6ZNK6 161 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 GGNQ86UU5 652 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 CDC26Q8NHZ8 85 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 ELP4Q96EB1 424 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 AMDHD1Q96NU7 426 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 FMO2Q99518 471 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 OR10A4Q9H209 315 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 GLIPR2Q9H4G4 154 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 MYNNQ9NPC7 610 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 GLRX2Q9NS18 164 aa13.35□□□□□ -0.27
PRKDC-204ENST00000521331 MCTS1Q9ULC4 181 aaKnown RBP13.35□□□□□ -0.27
PRKDC-204ENST00000521331 A0A087WZY1 265 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 SLC6A8P48029 635 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 RFX3P48380 749 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 IMPG1Q17R60 797 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 FAM71E1Q6IPT2 247 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 BEND4Q6ZU67 534 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 STK32CQ86UX6 486 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 WDR75Q8IWA0 830 aaKnown RBP13.34□□□□□ -0.27
PRKDC-204ENST00000521331 ZNF611Q8N823 705 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 SPATA3Q8NHX4 192 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 FAM76AQ8TAV0 307 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.34□□□□□ -0.275e-14■■■□□ 15.9
PRKDC-204ENST00000521331 L3HYPDHQ96EM0 354 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 TMEM216Q9P0N5 145 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 TIMM22Q9Y584 194 aa13.34□□□□□ -0.27
PRKDC-204ENST00000521331 EXOC1LA0A1B0GW35 172 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 HS3ST1O14792 307 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 SYNGR4O95473 234 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 GABRA3P34903 492 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 ATP5J2P56134 94 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRKDC-204ENST00000521331 PRSS53Q2L4Q9 553 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 GRAMD1BQ3KR37 738 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 VPS26BQ4G0F5 336 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 IKBIPQ70UQ0 350 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 CXXC5Q7LFL8 322 aaKnown RBP13.33□□□□□ -0.28
PRKDC-204ENST00000521331 GTPBP8Q8N3Z3 284 aaPredicted RBP13.33□□□□□ -0.28
PRKDC-204ENST00000521331 MMGT1Q8N4V1 131 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 OR10D3Q8NH80 312 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 IFT81Q8WYA0 676 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 PLPPR2Q96GM1 343 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 KCNA7Q96RP8 456 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 TMEM204Q9BSN7 226 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 ACTR6Q9GZN1 396 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 CLEC4AQ9UMR7 237 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 VDAC3Q9Y277 283 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 STAB1Q9NY15 2570 aa13.33□□□□□ -0.28
PRKDC-204ENST00000521331 DSCAMO60469 2012 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 SHISA8B8ZZ34 492 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 ALG1L2C9J202 215 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 H3BQF6 201 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 GMFGO60234 142 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 NGFRP08138 427 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 RAC1P63000 192 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 GTF2IRD2BQ6EKJ0 949 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 APOOLQ6UXV4 268 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 GTF2IRD2Q86UP8 949 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 WFDC8Q8IUA0 241 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 ZBTB8AQ96BR9 441 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 TRIM44Q96DX7 344 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-204ENST00000521331 ADGRG7Q96K78 797 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 IQCGQ9H095 443 aaKnown RBP13.32□□□□□ -0.28
PRKDC-204ENST00000521331 MID1IP1Q9NPA3 183 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 POLR3HQ9Y535 204 aaPredicted RBP13.32□□□□□ -0.28
PRKDC-204ENST00000521331 USF3Q68DE3 2245 aa13.32□□□□□ -0.28
PRKDC-204ENST00000521331 RAI1Q7Z5J4 1906 aaPredicted RBP13.31□□□□□ -0.28
PRKDC-204ENST00000521331 GXYLT2A0PJZ3 443 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms