RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 SIX5Q8N196 739 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 UBE2J2Q8N2K1 259 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 FAM98AQ8NCA5 519 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 ANKK1Q8NFD2 765 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 OR4F15Q8NGB8 312 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 OR51L1Q8NGJ5 315 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 FKBP10Q96AY3 582 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 DPYSL5Q9BPU6 564 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 RACGAP1Q9H0H5 632 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 MED20Q9H944 212 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 ATP13A2Q9NQ11 1180 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 PTGFRNQ9P2B2 879 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 LOC110117498-PIK3R3F6TDL0 507 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 ARHGAP33O14559 1287 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 REM1O75628 298 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CDRT1O95170 752 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 APOA1P02647 267 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CELP19835 753 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 IDUAP35475 653 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 MAN2A2P49641 1150 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 PLBD1Q6P4A8 553 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CPOQ8IVL8 374 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 LINC00471Q8N535 108 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 C19orf47Q8N9M1 422 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 ABHD8Q96I13 439 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CNDP2Q96KP4 475 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 GPA33Q99795 319 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 LRRC61Q9BV99 259 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 MND1Q9BWT6 205 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 PDE7BQ9NP56 450 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CES1P1Q9UKY3 287 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 MED31Q9Y3C7 131 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CLCA3PQ9Y6N3 262 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 CENPVL1A0A0U1RR11 272 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 FAM86C2PA6NEL3 165 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 M0R082 166 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 ACP2P11117 423 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 TSFMP43897 325 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 MTNR1AP48039 350 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 PRAMEF17Q5VTA0 474 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 C22orf42Q6IC83 251 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 SLC36A4Q6YBV0 504 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 ZNF836Q6ZNA1 936 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 GDF7Q7Z4P5 450 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 OR4N2Q8NGD1 307 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 TRUB1Q8WWH5 349 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 ACOT11Q8WXI4 607 aaPredicted RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 TANKQ92844 425 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 ZNF681Q96N22 645 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 SECISBP2Q96T21 854 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 UBE2ZQ9H832 354 aaPredicted RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 BCL2L10Q9HD36 194 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 Q9N2J8 555 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 KLHL1Q9NR64 748 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 DHCR7Q9UBM7 475 aaKnown RBP10.59□□□□□ -0.71
CLK4-206ENST00000520878 FTSJ1Q9UET6 329 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 LRRK1Q38SD2 2015 aa10.59□□□□□ -0.71
CLK4-206ENST00000520878 HELZP42694 1942 aaKnown RBP10.58□□□□□ -0.71
CLK4-206ENST00000520878 CASKO14936 926 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 GALR3O60755 368 aaPredicted RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 ZNF217O75362 1048 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 FUT5Q11128 374 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 CCINQ13939 588 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 MLC1Q15049 377 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 MAPK14Q16539 360 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 SLX4IPQ5VYV7 408 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 ZNF367Q7RTV3 350 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 ZNF619Q8N2I2 560 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 OR4C6Q8NH72 309 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 OSTF1Q92882 214 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 DOK1Q99704 481 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 PHF7Q9BWX1 381 aaPredicted RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 MALT1Q9UDY8 824 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 MDC1Q14676 2089 aaKnown RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 CDC14CA4D256 554 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 OR2B3O76000 313 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 SLC2A10O95528 541 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 GYPBP06028 91 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 DBIP07108 87 aaKnown RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 CT62P0C5K7 136 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 BMP8BP34820 402 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 DHPSP49366 369 aaPredicted RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLK4-206ENST00000520878 TAB1Q15750 504 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 BMP8AQ7Z5Y6 402 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 PRR22Q8IZ63 422 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 OR2T33Q8NG76 320 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 RFKQ969G6 155 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 EFHD2Q96C19 240 aaPredicted RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 MSLNLQ96KJ4 702 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 PIGUQ9H490 435 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 MAP1BP46821 2468 aaKnown RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 PLXND1Q9Y4D7 1925 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 TRAV27A0A087WT01 109 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 HYKKA2RU49 373 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 TRAPPC13A5PLN9 417 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 CTDSP2O14595 271 aa10.58□□□□□ -0.72
CLK4-206ENST00000520878 KHNYNO15037 678 aaKnown RBP10.58□□□□□ -0.72
CLK4-206ENST00000520878 RAB36O95755 333 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms