RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 TMPRSS12Q86WS5 348 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 LAX1Q8IWV1 398 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 PHC2Q8IXK0 858 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 LRRC56Q8IYG6 542 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TBC1D3Q8IZP1 549 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CACTIN-AS1Q8N1I8 211 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CLIP4Q8N3C7 705 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 HORMAD2Q8N7B1 307 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 OR52I1Q8NGK6 324 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 VANGL1Q8TAA9 524 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TMEM163Q8TC26 289 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ACOT12Q8WYK0 555 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ZC3HAV1LQ96H79 300 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 DIRAS2Q96HU8 199 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 FRMD6Q96NE9 622 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 UBL7Q96S82 380 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ORAI3Q9BRQ5 295 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 NDEL1Q9GZM8 345 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RSPH9Q9H1X1 276 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 OR2AG1Q9H205 316 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RNF167Q9H6Y7 350 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RNF121Q9H920 327 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 C14orf119Q9NWQ9 140 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TXNL4BQ9NX01 149 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TVP23BQ9NYZ1 205 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RHCGQ9UBD6 479 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 TRPC4Q9UBN4 977 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 DKK4Q9UBT3 224 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 KLHL21Q9UJP4 597 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ENTPD4Q9Y227 616 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 POLHQ9Y253 713 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ASF1AQ9Y294 204 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 CA5BQ9Y2D0 317 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 RBMX2Q9Y388 322 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 SPIN1Q9Y657 262 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 DNMT3AQ9Y6K1 912 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 APC2O95996 2303 aa8.09□□□□□ -1.11
CTNNA1-223ENST00000520520 ACACAQ13085 2346 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 EDDM13A0A1B0GTR0 161 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 GSAPA4D1B5 854 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PRAMEF25A6NGN4 478 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 GPR89AB7ZAQ6 455 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 C1QTNF3-AMACRE9PGA6 284 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PYCARD-AS1I3L0S3 204 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PLPP1O14494 284 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SEC14L5O43304 696 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 ORC5O43913 435 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 BRINP1O60477 761 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 CLEC3AO75596 197 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 POP7O75817 140 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 C1QL1O75973 258 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 UBXN7O94888 489 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 AGR2O95994 175 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 HLA-DQB1P01920 261 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 GBAP04062 536 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 HLA-DPB1P04440 258 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SLC35G4P0C7Q5 338 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 GPR89BP0CG08 455 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 ERGP11308 486 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 MAGP20916 626 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 AZGP1P25311 298 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 EPHA8P29322 1005 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PDHA2P29803 388 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 ERP29P30040 261 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 FGF9P31371 208 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SSR2P43308 183 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 MAP2K3P46734 347 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 CCT3P49368 545 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 ARRB1P49407 418 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 METAP1P53582 386 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 CASP9P55211 416 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 TAS2R41P59536 307 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PRR5P85299 388 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 DAB2P98082 770 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 TGM3Q08188 693 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 GINS1Q14691 196 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SF3B4Q15427 424 aaKnown RBP eCLIP8.08□□□□□ -1.123e-7■□□□□ 10.2
CTNNA1-223ENST00000520520 SHBQ15464 509 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 TRAM1Q15629 374 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SNAPC1Q16533 368 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 CARTPTQ16568 116 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 DUSP7Q16829 419 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 HNRNPA1L2Q32P51 320 aaKnown RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 GPAT3Q53EU6 434 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SYT14P1Q58G82 188 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 C1QTNF12Q5T7M4 302 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 HACD4Q5VWC8 232 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 FAM46CQ5VWP2 391 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 LIPKQ5VXJ0 399 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 BICRALQ6AI39 1079 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 RRM2BQ7LG56 351 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 SZRD1Q7Z422 152 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 FAM129CQ86XR2 697 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 TCTE3Q8IZS6 198 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 RDH10Q8IZV5 341 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 KLHL36Q8N4N3 616 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PLA2G15Q8NCC3 412 aa8.08□□□□□ -1.12
CTNNA1-223ENST00000520520 PSD4Q8NDX1 1056 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms