RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ACOX3O15254 700 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 FGF17O60258 216 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ICOSLGO75144 302 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 NDUFS7O75251 213 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PPM1BO75688 479 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PLGP00747 810 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CD8AP01732 235 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ABCB1P08183 1280 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 FAM153BP0C7A2 387 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 C1GALT1C1LP0DN25 315 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 APEHP13798 732 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ATP6V1B1P15313 513 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 TPSB2P20231 275 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 FUT4P22083 530 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 HIST1H1TP22492 207 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ATP5A1P25705 553 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 MGAT1P26572 445 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 DPP4P27487 766 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SERPINB1P30740 379 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 KRT20P35900 424 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SRP14P37108 136 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SLC1A2P43004 574 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 LIMS1P48059 325 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 NEK2P51955 445 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CTBP2P56545 445 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 DSCR4P56555 118 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 BASP1P80723 227 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 TNFRSF17Q02223 184 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CAV1Q03135 178 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 LAPTM5Q13571 262 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SLBPQ14493 270 aaKnown RBP eCLIP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF267Q14586 743 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PON3Q15166 354 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 RASA2Q15283 850 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 TPSAB1Q15661 275 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CCNG2Q16589 344 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CR1LQ2VPA4 569 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 AP5B1Q2VPB7 878 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 FAM153CQ494X1 144 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 TMEM35AQ53FP2 167 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PAGE2BQ5JRK9 111 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 NXNQ6DKJ4 435 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF549Q6P9A3 640 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 C16orf54Q6UWD8 224 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PLXDC2Q6UX71 529 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 DEF8Q6ZN54 512 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 IL17RELQ6ZVW7 336 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 TBC1D1Q86TI0 1168 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 MYLK4Q86YV6 388 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SLC44A2Q8IWA5 706 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 METTL25Q8N6Q8 603 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ACOT4Q8N9L9 421 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ZNF540Q8NDQ6 660 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 OR7G1Q8NGA0 311 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ACMSDQ8TDX5 336 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 FAM216AQ8WUB2 273 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CHAC2Q8WUX2 184 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ADIPOR1Q96A54 375 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 MSI2Q96DH6 328 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 LINGO1Q96FE5 620 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 LCORQ96JN0 433 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 DHRS1Q96LJ7 313 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 JMJD8Q96S16 334 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 MAPKAP1Q9BPZ7 522 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ELAC2Q9BQ52 826 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 NUDT16L1Q9BRJ7 211 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CENPKQ9BS16 269 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PIMREGQ9BSJ6 248 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 EFCAB11Q9BUY7 163 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 RBM4Q9BWF3 364 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PINK1Q9BXM7 581 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CACNG6Q9BXT2 260 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SERHLQ9NQF3 203 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 FBXO6Q9NRD1 293 aaPredicted RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PAPOLBQ9NRJ5 636 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 CBLN4Q9NTU7 201 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ZIM2Q9NZV7 527 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 ARMCX1Q9P291 453 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 HEY2Q9UBP5 337 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 SLC22A14Q9Y267 594 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 B3GALT5Q9Y2C3 310 aa4.36□□□□□ -1.71
SDCBP-207ENST00000520168 KMT2CQ8NEZ4 4911 aaKnown RBP4.36□□□□□ -1.71
SDCBP-207ENST00000520168 PLCE1Q9P212 2302 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 A0A0B4J203 849 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA8QA0A0J9YX86 632 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 MYOCOSA0A1B0GUC4 107 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA8OA6NCC3 632 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PRAMEF25A6NGN4 478 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 OR6C70A6NIJ9 312 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA8NF8WBI6 632 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TRIM77I1YAP6 450 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GOLGA8RI6L899 631 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 HRKO00198 91 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 LIASO43766 372 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 PLOD3O60568 738 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 TSC22D2O75157 780 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 SS18L1O75177 396 aaPredicted RBP4.35□□□□□ -1.71
SDCBP-207ENST00000520168 WDR47O94967 919 aa4.35□□□□□ -1.71
SDCBP-207ENST00000520168 GPR75O95800 540 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms