RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 PITPNAQ00169 270 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 AQP6Q13520 282 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 EXOSC7Q15024 291 aaKnown RBP10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 TBRG1Q3YBR2 411 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 SAXO2Q658L1 398 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 FCRLBQ6BAA4 426 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 RASSF6Q6ZTQ3 369 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR10H5Q8NGA6 315 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 TMEM163Q8TC26 289 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 TMEM239Q8WW34 195 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 FGF22Q9HCT0 170 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 BAIAP2Q9UQB8 552 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 ENTPD2Q9Y5L3 495 aa10.57□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF879B4DU55 563 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SGK494L7N484 410 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PDCD5O14737 125 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PRSS23O95084 383 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 RHAGQ02094 409 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 ELOCQ15369 112 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 GPALPP1Q8IXQ4 340 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SLC7A5P1Q8MH63 180 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 C1orf216Q8TAB5 229 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 TGM7Q96PF1 710 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 TM9SF2Q99805 663 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 NAALAD2Q9Y3Q0 740 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 WWP2O00308 870 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 KLHL18O94889 574 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 CPMP14384 443 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PKLRP30613 574 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 RABIFP47224 123 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 ARRB1P49407 418 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 NKX2-5P52952 324 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 EPHA5P54756 1037 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 MLLT11Q13015 90 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SOWAHCQ53LP3 525 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 FAAH2Q6GMR7 532 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 XAF1Q6GPH4 301 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PGBD2Q6P3X8 592 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF619Q8N2I2 560 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 C10orf111Q8N326 155 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 VWA5B2Q8N398 1253 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 YIPF7Q8N8F6 280 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 GALNT6Q8NCL4 622 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR4K13Q8NH42 304 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 LINC00615Q96LM1 132 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 BEX2Q9BXY8 128 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 DDX31Q9H8H2 851 aaKnown RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SLC52A3Q9NQ40 469 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SIRT5Q9NXA8 310 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 USP36Q9P275 1121 aaKnown RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SNX11Q9Y5W9 270 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 CDH10Q9Y6N8 788 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 CEP350Q5VT06 3117 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 A8MVJ9 347 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 H3BSH0 61 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PRAMEF4O60810 478 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 IGFBP1P08833 259 aaPredicted RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 BSGP35613 385 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 AP3S2P59780 193 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 TSPAN31Q12999 210 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 DCST2Q5T1A1 773 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 UBE2UQ5VVX9 321 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PRAMEF9Q5VWM5 478 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 SLC48A1Q6P1K1 146 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 CCDC28AQ8IWP9 274 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 ASCC1Q8N9N2 400 aaKnown RBP10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR4F15Q8NGB8 312 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR52E2Q8NGJ4 325 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR51L1Q8NGJ5 315 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 GAL3ST1Q99999 423 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF559Q9BR84 538 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 LMAN1LQ9HAT1 526 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 NEK6Q9HC98 313 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 PRODH2Q9UF12 536 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 ERVK-11Q9UQG0 969 aa10.56□□□□□ -0.72
PCDHGB4-201ENST00000519479 GXYLT2A0PJZ3 443 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 HYKKA2RU49 373 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 FLRT2O43155 660 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 ITGA10O75578 1167 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 FAUP35544 74 aaKnown RBP10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 TGFBR1P36897 503 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 MAP2K3P46734 347 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 DHPSP49366 369 aaPredicted RBP10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 C7orf34Q96L11 122 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 BTBD2Q9BX70 525 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 CPNE7Q9UBL6 633 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 CLEC2DQ9UHP7 191 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZNF443Q9Y2A4 671 aaPredicted RBP10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 CORINQ9Y5Q5 1042 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 FKBP7Q9Y680 259 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 RALGAPA2Q2PPJ7 1873 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 TSPAN11A1L157 253 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 ZSCAN5BA6NJL1 495 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 WASHC1A8K0Z3 465 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 I3L521 148 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 FUCA1P04066 466 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 MMP11P24347 488 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 OR12D2P58182 307 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 SLX4IPQ5VYV7 408 aa10.55□□□□□ -0.72
PCDHGB4-201ENST00000519479 SYCE2Q6PIF2 218 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms