RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 PARGQ86W56 976 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 MAML2Q8IZL2 1156 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 MMP21Q8N119 569 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SFXN5Q8TD22 340 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 ACOT12Q8WYK0 555 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 EXOSC8Q96B26 276 aaKnown RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 FUZQ9BT04 418 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 C11orf54Q9H0W9 315 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 TCEAL2Q9H3H9 227 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 ABCB9Q9NP78 766 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SLAMF7Q9NQ25 335 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SEMA3GQ9NS98 782 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SIRT3Q9NTG7 399 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 TAS2R16Q9NYV7 291 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 STMN3Q9NZ72 180 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 PLEKHB1Q9UF11 243 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 TESQ9UGI8 421 aaKnown RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 SNX11Q9Y5W9 270 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 GON4LQ3T8J9 2241 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 TRDV1A0A1B0GX56 115 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 A0A1W2PRQ8 180 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 J3KTA2 159 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SGK494L7N484 410 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 HBQ1P09105 142 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 CTSEP14091 401 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 UGT2B7P16662 529 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 TNFRSF1BP20333 461 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 M6PRP20645 277 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 ZNF10P21506 573 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 GABRA5P31644 462 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 GPR18Q14330 331 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SF3A2Q15428 464 aaKnown RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 GPR19Q15760 415 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SPDYE7PQ495Y7 208 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 ZNF542PQ5EBM4 170 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 WDR45BQ5MNZ6 344 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 HACD4Q5VWC8 232 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 BICRALQ6AI39 1079 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 ZNF730Q6ZMV8 503 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 QSOX2Q6ZRP7 698 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 C6orf120Q7Z4R8 191 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 SAMD14Q8IZD0 417 aaPredicted RBP17.11■□□□□ 0.33
SDC2-202ENST00000518385 RSC1A1Q92681 617 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 UFD1Q92890 307 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 MIXL1Q9H2W2 232 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 GIMAP4Q9NUV9 329 aa17.11■□□□□ 0.33
SDC2-202ENST00000518385 A0A1W2PQL4 384 aaPredicted RBP17.1■□□□□ 0.33
SDC2-202ENST00000518385 CHST10O43529 356 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 ORC5O43913 435 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 PRKYO43930 277 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 OR10H3O60404 316 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 SLC19A2O60779 497 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 POU1F1P28069 291 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 IFNGR2P38484 337 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 SOX3P41225 446 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 KCNJ5P48544 419 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 CCT3P49368 545 aaKnown RBP17.1■□□□□ 0.33
SDC2-202ENST00000518385 BTG1P62324 171 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 CSTF1Q05048 431 aaKnown RBP17.1■□□□□ 0.33
SDC2-202ENST00000518385 ACSM1Q08AH1 577 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 HNRNPA0Q13151 305 aaKnown RBP17.1■□□□□ 0.33
SDC2-202ENST00000518385 SUZ12Q15022 739 aaKnown RBP17.1■□□□□ 0.33
SDC2-202ENST00000518385 PYDC2Q56P42 97 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 FBXO42Q6P3S6 717 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 PGBD2Q6P3X8 592 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 FIGLAQ6QHK4 219 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 CEACAM20Q6UY09 585 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 VN1R4Q7Z5H5 301 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 FAM20CQ8IXL6 584 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 AMER3Q8N944 861 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 CAMKVQ8NCB2 501 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 OR52I1Q8NGK6 324 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 OR8K5Q8NH50 307 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 OR5AK3PQ8NH89 298 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 AMDHD1Q96NU7 426 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 BBS4Q96RK4 519 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 TIGARQ9NQ88 270 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 APOBEC3BQ9UH17 382 aaKnown RBP17.1■□□□□ 0.33
SDC2-202ENST00000518385 ACSL6Q9UKU0 697 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 POLHQ9Y253 713 aa17.1■□□□□ 0.33
SDC2-202ENST00000518385 OR6C74A6NCV1 312 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 RECKO95980 971 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 CSF2P04141 144 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 SMIM10L1P0DMW3 83 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 ACP2P11117 423 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 POU2F1P14859 743 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 SMSP52788 366 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 CLDN20P56880 219 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 GALK2Q01415 458 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 IKZF1Q13422 519 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 GNA13Q14344 377 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 TCEA2Q15560 299 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 CEBPEQ15744 281 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 ENTPD8Q5MY95 495 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 SLC48A1Q6P1K1 146 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 TAF8Q7Z7C8 310 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 MRGPREQ86SM8 312 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 C11orf74Q86VG3 221 aa17.09■□□□□ 0.33
SDC2-202ENST00000518385 ZNF655Q8N720 491 aaPredicted RBP17.09■□□□□ 0.33
SDC2-202ENST00000518385 TMEM105Q8N8V8 129 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms