RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 VRK3Q8IV63 474 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 DENND6AQ8IWF6 608 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ZC3H7AQ8IWR0 971 aaKnown RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 KLHDC8AQ8IYD2 350 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ALDH16A1Q8IZ83 802 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ADGRF3Q8IZF5 1079 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 MYO1HQ8N1T3 1032 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 TCAIMQ8N3R3 496 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC5A8Q8N695 610 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 TMEM251Q8N6I4 163 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 C9orf106Q8NAJ2 232 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 OR4E2Q8NGC2 313 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 OR52E1Q8NGJ3 308 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 OR9A1PQ8NGU1 263 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 OR6Y1Q8NGX8 325 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 OR2L8Q8NGY9 312 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 RHEBL1Q8TAI7 183 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 STAG3L4Q8TBR4 150 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ACMSDQ8TDX5 336 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 EEF1AKMT1Q8WVE0 214 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC44A1Q8WWI5 657 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 LZICQ8WZA0 190 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 SMPDL3AQ92484 453 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 FRZBQ92765 325 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 DPF1Q92782 380 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC35B4Q969S0 331 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 APOPT1Q96IL0 206 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 MPP4Q96JB8 637 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 CLPTM1LQ96KA5 538 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 HIST1H2AHQ96KK5 128 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 FERD3LQ96RJ6 166 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 PAFAH2Q99487 392 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 GPR21Q99679 349 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 RBBP8Q99708 897 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 HIST1H2AJQ99878 128 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 CENPKQ9BS16 269 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 H2AFJQ9BTM1 129 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ST6GALNAC5Q9BVH7 336 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 TTTY12Q9BZ98 90 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 PITHD1Q9GZP4 211 aaPredicted RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 DERL2Q9GZP9 239 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 VPS11Q9H270 941 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 VCX3BQ9H321 246 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 CLK4Q9HAZ1 481 aaKnown RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 S100A14Q9HCY8 104 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 VCX3AQ9NNX9 186 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 FAM60AQ9NP50 221 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 G6PC2Q9NQR9 355 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 INIPQ9NRY2 104 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 DEPPQ9NTK1 212 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 IMP3Q9NV31 184 aaKnown RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 DNAJC11Q9NVH1 559 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 INTS7Q9NVH2 962 aaKnown RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 MKS1Q9NXB0 559 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 UBAP1Q9NZ09 502 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 CISD1Q9NZ45 108 aaKnown RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 PSMC3IPQ9P2W1 217 aaPredicted RBP2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 HEY2Q9UBP5 337 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ZNF69Q9UC07 566 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC7A8Q9UHI5 535 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 DCTN4Q9UJW0 460 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 PACSIN3Q9UKS6 424 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 POMT2Q9UKY4 750 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 SLC39A10Q9ULF5 831 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 PCDHGB4Q9UN71 923 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 CHMP2BQ9UQN3 213 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 ACOT9Q9Y305 439 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 IKBKGQ9Y6K9 419 aa2.78□□□□□ -1.96
SCARNA13-201ENST00000516672 FAT3Q8TDW7 4589 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 MED12LQ86YW9 2145 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 A0A0J9YY10 115 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 IQANK1A0A1B0GTG1 560 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 FAM95CA0A1B0GW59 222 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 ATP6AP2A0A1C7CYW4 349 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 FITM1A5D6W6 292 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 OR6C74A6NCV1 312 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 TRIM64CA6NLI5 447 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 IQCF5A8MTL0 148 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 ARHGEF33A8MVX0 844 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 CXorf49A8MYA2 514 aaPredicted RBP2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 POC1B-GALNT4F8VUJ3 575 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 BTN3A3O00478 584 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 TXNDC9O14530 226 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 ZNF195O14628 629 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 GYG2O15488 501 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 HOXA3O43365 443 aaPredicted RBP2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 DENRO43583 198 aaKnown RBP2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 DNAJA2O60884 412 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 NIPSNAP2O75323 286 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 FKBP6O75344 327 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 PRKRAO75569 313 aaKnown RBP2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 ATP6AP2O75787 350 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 SEC24DO94855 1032 aaPredicted RBP2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 KLHL2O95198 593 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 MED26O95402 600 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 SLC16A8O95907 504 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 CD3EP07766 207 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 INHBAP08476 426 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 ANXA5P08758 320 aa2.77□□□□□ -1.97
SCARNA13-201ENST00000516672 CHRM5P08912 532 aaPredicted RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms