RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 CSNK1A1LQ8N752 337 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 OR5AU1Q8NGC0 362 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 C18orf25Q96B23 403 aaPredicted RBP3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 HPDLQ96IR7 371 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 SERAC1Q96JX3 654 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 VPS35Q96QK1 796 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 DPH7Q9BTV6 452 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 TSSK1BQ9BXA7 367 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 HPF1Q9NWY4 346 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 EHFQ9NZC4 300 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 DPM3Q9P2X0 92 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 MOKQ9UQ07 419 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 AURKCQ9UQB9 309 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 EIF3LQ9Y262 564 aaKnown RBP3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 L3MBTL1Q9Y468 752 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 USP16Q9Y5T5 823 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 U3KQV3 271 aa3.75□□□□□ -1.81
HMGCS1-207ENST00000514610 ADAMTS9Q9P2N4 1935 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 SAGE2PA6NJ88 616 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 FAM74A7A6NL05 159 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 DUX1O43812 170 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 MBD3O95983 291 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 IFNB1P01574 187 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 CHRNA1P02708 482 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 H2AFZP0C0S5 128 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 NOVA1P51513 510 aaKnown RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 KRTAP10-3P60369 221 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 POLR2FP61218 127 aaKnown RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 RPL8P62917 257 aaKnown RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 IGLV3-21P80748 117 aaPredicted RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 PRKCEQ02156 737 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 CD47Q08722 323 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF154Q13106 437 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 DCAF4L1Q3SXM0 396 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 FAM74A3Q4VXF1 159 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 PRR30Q53SZ7 412 aaPredicted RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 ASPHD2Q6ICH7 369 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 LANCL3Q6ZV70 420 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 M1APQ8TC57 530 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 TMEM80Q96HE8 168 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 NFKBIZQ9BYH8 718 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 POLR3FQ9H1D9 316 aaPredicted RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 RWDD1Q9H446 243 aaPredicted RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 RHOJQ9H4E5 214 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 LIN28AQ9H9Z2 209 aaKnown RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 PNO1Q9NRX1 252 aaKnown RBP3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 VNN3Q9NY84 501 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 RNF6Q9Y252 685 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 GMPPBQ9Y5P6 360 aa3.74□□□□□ -1.81
HMGCS1-207ENST00000514610 K7EPI3 171 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 SMPD2O60906 423 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 STX11O75558 287 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 KRTAP1-4P0C5Y4 121 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 DLSTP36957 453 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF311Q5JNZ3 666 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 PVRIGQ6DKI7 326 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 CBLN3Q6UW01 205 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 IFNEQ86WN2 208 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF677Q86XU0 584 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 OR13F1Q8NGS4 319 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 OR9A4Q8NGU2 314 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 NANPQ8TBE9 248 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 CCDC110Q8TBZ0 833 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 TAF4BQ92750 862 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 COQ10BQ9H8M1 238 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 POLE3Q9NRF9 147 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 MFHAS1Q9Y4C4 1052 aa3.73□□□□□ -1.81
HMGCS1-207ENST00000514610 SCRG1O75711 98 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 P0C879 139 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 BCKDHAP12694 445 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 H2AFXP16104 143 aaPredicted RBP3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 MDH1P40925 334 aaKnown RBP3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 NAPAP54920 295 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 TEX44Q53QW1 395 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 ANKRD37Q7Z713 158 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 GRAMD2AQ8IUY3 354 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 FBXO16Q8IX29 292 aaPredicted RBP3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 ZBTB44Q8NCP5 570 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 OR2T33Q8NG76 320 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 FAF2Q96CS3 445 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 FEM1AQ9BSK4 669 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 DHX33Q9H6R0 707 aaKnown RBP3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 RDH8Q9NYR8 311 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 CYTH4Q9UIA0 394 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 CLEC4EQ9ULY5 219 aa3.72□□□□□ -1.81
HMGCS1-207ENST00000514610 ZNF318Q5VUA4 2279 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 IGLV8-61A0A075B6I0 122 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 CLDN3O15551 220 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 JAK2O60674 1132 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 CD55P08174 381 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 NF2P35240 595 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 MAGEA5P43359 124 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 BDKRB1P46663 353 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 OSTNP61366 133 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 RND3P61587 244 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 KCNJ11Q14654 390 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 TMEM41BQ5BJD5 291 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 CELF3Q5SZQ8 465 aaKnown RBP3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 DCST2Q5T1A1 773 aa3.71□□□□□ -1.82
HMGCS1-207ENST00000514610 SULT1C3Q6IMI6 304 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms