RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-222	ENST00000514006	NPIPA7	E9PJI5	369 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NR5A2	O00482	541 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NTN3	O00634	580 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OR7A17	O14581	309 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SNAP91	O60641	907 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	FCMR	O60667	390 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HBQ1	P09105	142 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NPIPA8	P0DM63	369 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ATP5A1	P25705	553 aa	Known RBP	4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SPR	P35270	261 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SLC1A4	P43007	532 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BDKRB1	P46663	353 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF33B	Q06732	778 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CALCOCO2	Q13137	446 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IDI1	Q13907	227 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZIC1	Q15915	447 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	LINC00242	Q5T6M2	205 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	FAM219B	Q5XKK7	198 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	FAM71F2	Q6NXP2	309 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GCNT7	Q6ZNI0	430 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RUFY3	Q7L099	469 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NLRP9	Q7RTR0	991 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MOB3B	Q86TA1	216 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	KLHDC8B	Q8IXV7	354 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF614	Q8N883	585 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF491	Q8N8L2	437 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BEST4	Q8NFU0	473 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OR4D5	Q8NGN0	318 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SSC4D	Q8WTU2	575 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MOCOS	Q96EN8	888 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PELI1	Q96FA3	418 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	C12orf66	Q96MD2	445 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TCEANC2	Q96MN5	208 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	CCNL2	Q96S94	520 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	LITAF	Q99732	161 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	DUSP16	Q9BY84	665 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SGK2	Q9HBY8	427 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ABCC13	Q9NSE7	274 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ETNK2	Q9NVF9	386 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	THEG	Q9P2T0	379 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SEC14L3	Q9UDX4	400 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NPIPA1	Q9UND3	350 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SALL1	Q9NSC2	1324 aa		4.12	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGLV7-46	A0A075B6I9	117 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GOLGA8O	A6NCC3	632 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OR6C65	A6NJZ3	312 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006		E9PBE3	544 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GOLGA8N	F8WBI6	632 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	KCNAB3	O43448	404 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MED7	O43513	233 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RAMP1	O60894	148 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RHBDL1	O75783	438 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	LRAT	O95237	230 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SNRPC	P09234	159 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	WNT2	P09544	360 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	UQCRFS1P1	P0C7P4	283 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HSMCR30	P0CW71	290 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF10	P21506	573 aa	Predicted RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RPL4	P36578	427 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	GNPDA1	P46926	289 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OTUD4	Q01804	1114 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NECTIN1	Q15223	517 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SSX2	Q16385	188 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SNAI3	Q3KNW1	292 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	DCST2	Q5T1A1	773 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PRSS48	Q7RTY5	328 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RNF130	Q86XS8	419 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BBS5	Q8N3I7	341 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006		Q8N9G6	341 aa	Predicted RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SUMF1	Q8NBK3	374 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OR1F12	Q8NHA8	337 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RFESD	Q8TAC1	157 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	HCAR2	Q8TDS4	363 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NTNG2	Q96CW9	530 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	WBP1	Q96G27	269 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SLC6A7	Q99884	636 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	RBM4	Q9BWF3	364 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	OCR1	Q9BZK8	76 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	NXF5	Q9H1B4	397 aa	Known RBP	4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF696	Q9H7X3	374 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	BARHL2	Q9NY43	387 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MLX	Q9UH92	298 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SPATA2	Q9UM82	520 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PIGL	Q9Y2B2	252 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TMED5	Q9Y3A6	229 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ALG6	Q9Y672	507 aa		4.11	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	IGLV4-3	A0A075B6K6	122 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MEX3A	A1L020	520 aa	Known RBP	4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TRABD2B	A6NFA1	517 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF716	A6NP11	495 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	MSH4	O15457	936 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF264	O43296	627 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	TRIM3	O75382	744 aa	Predicted RBP	4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	F10	P00742	488 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SP1	P08047	785 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	H2BFM	P0C1H6	154 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	ZNF735	P0CB33	412 aa		4.1	□□□□□ -1.75
CALCOCO2-222	ENST00000514006	SLC2A3	P11169	496 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms