RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 IGKV1-17P01599 117 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CCNA2P20248 432 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 HOXD10P28358 340 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ADSSP30520 456 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 NSFP46459 744 aaKnown RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CCL11P51671 97 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF136P52737 540 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ROR1Q01973 937 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 PLOD1Q02809 727 aaPredicted RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 C16orf72Q14CZ0 275 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TEX44Q53QW1 395 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 HECTD3Q5T447 861 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TSPO2Q5TGU0 170 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 GPR157Q5UAW9 335 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 PRAMEF7Q5VXH5 474 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TMED8Q6PL24 325 aaPredicted RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM270Q6UE05 265 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 IGFL1Q6UW32 110 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 BTNL3Q6UXE8 466 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 B3GLCTQ6Y288 498 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF429Q86V71 674 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 KRTAP13-1Q8IUC0 172 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 SAXO1Q8IYX7 474 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CENPSQ8N2Z9 138 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 BPIFB2Q8N4F0 458 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CERS5Q8N5B7 392 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM252Q8N6L7 170 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 MLKLQ8NB16 471 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 OR2AP1Q8NGE2 309 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 OR9A4Q8NGU2 314 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 BLOC1S5Q8TDH9 187 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 BCL2L2Q92843 193 aaPredicted RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CFAP36Q96G28 342 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 TSPAN18Q96SJ8 248 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 RNF126Q9BV68 326 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CARD6Q9BX69 1037 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 SLC17A9Q9BYT1 436 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ABCG4Q9H172 646 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 NARFLQ9H6Q4 476 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 KAT8Q9H7Z6 458 aaKnown RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 AKIRIN1Q9H9L7 192 aaPredicted RBP1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CAB39LQ9H9S4 337 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 APMAPQ9HDC9 416 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 PIGVQ9NUD9 493 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 ABCB8Q9NUT2 735 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 COPS7AQ9UBW8 275 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 MAD2L2Q9UI95 211 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 FZR1Q9UM11 496 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 STX8Q9UNK0 236 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 CDH10Q9Y6N8 788 aa1.14□□□□□ -2.23
PDGFC-208ENST00000512711 A0A096LNJ9 63 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 IGHV7-81A0A0B4J1V7 117 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 MACROD2A1Z1Q3 448 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF320A2RRD8 509 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ARPC1BO15143 372 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 NME2P1O60361 137 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 RAMP1O60894 148 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ATP6V1G1O75348 118 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 CHRNA1P02708 482 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 CD55P08174 381 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ZCCHC18P0CG32 403 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 FERP16591 822 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 MARCKSP29966 332 aaPredicted RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 HPDP32754 393 aaPredicted RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 RPL4P36578 427 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 CNN1P51911 297 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 VLDLRP98155 873 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SLAQ13239 276 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 BTG3Q14201 252 aaPredicted RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 KARSQ15046 597 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 UBE2V2Q15819 145 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SLC39A12Q504Y0 691 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 LINC00483Q53H64 154 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SLX4IPQ5VYV7 408 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SLC39A4Q6P5W5 647 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 CWC27Q6UX04 472 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 RNF165Q6ZSG1 346 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 CYS1Q717R9 158 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 LINC01551Q86U37 167 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 YRDCQ86U90 279 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SERPINA9Q86WD7 417 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 GPBP1Q86WP2 473 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 FAM71E2Q8N5Q1 922 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF740Q8NDX6 193 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 TMEM80Q96HE8 168 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ARHGDIGQ99819 225 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 FAM124BQ9H5Z6 455 aaPredicted RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 GRPEL1Q9HAV7 217 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 PAK1IP1Q9NWT1 392 aaPredicted RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 DUS2Q9NX74 493 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 AKAP7Q9P0M2 348 aaPredicted RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 RIMS3Q9UJD0 308 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 ZNF225Q9UK10 706 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SCML2Q9UQR0 700 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 IFT52Q9Y366 437 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 EXOSC1Q9Y3B2 195 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 USP16Q9Y5T5 823 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 SNX5Q9Y5X3 404 aa1.13□□□□□ -2.23
PDGFC-208ENST00000512711 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.13□□□□□ -2.23
PDGFC-208ENST00000512711 IGLV4-60A0A075B6I1 120 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms