RNA–Protein interactions for RNA: ENST00000512078.5

DEPDC1B-205, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 1,596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-205ENST00000512078 RBMS3Q6XE24 437 aaKnown RBP6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 C17orf107Q6ZR85 190 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 ZNF433Q8N7K0 673 aaPredicted RBP6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 SIGLECL1Q8N7X8 197 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 TOR1AIP2Q8NFQ8 470 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 OR52N5Q8NH56 324 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 CLDND2Q8NHS1 167 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 NANPQ8TBE9 248 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 MRAPQ8TCY5 172 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 CALML6Q8TD86 181 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 WDR60Q8WVS4 1066 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 ZNF669Q96BR6 464 aaPredicted RBP6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 SERPINB12Q96P63 405 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 DUX5Q96PT3 197 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 TMPRSS13Q9BYE2 586 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 TSGA10Q9BZW7 698 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 SLC52A3Q9NQ40 469 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 BCAP29Q9UHQ4 241 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 ZNF639Q9UID6 485 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 FBXO9Q9UK97 447 aaPredicted RBP6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 GPR55Q9Y2T6 319 aaPredicted RBP6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 PLLPQ9Y342 182 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 CORINQ9Y5Q5 1042 aa6.72□□□□□ -1.33
DEPDC1B-205ENST00000512078 A0A0A6YYD5 115 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 A0A0J9YW62 118 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ZCWPW2A0A1B0GU75 182 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 A0A1B0GUS0 222 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 SLC22A31A6NKX4 558 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ATP6V1G2-DDX39BF2Z307 99 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PLPP1O14494 284 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CLGNO14967 610 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CBFA2T2O43439 604 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 TMPRSS11DO60235 418 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CLDN9O95484 217 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CBX7O95931 251 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 KNG1P01042 644 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 YES1P07947 543 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 TPM1P09493 284 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 GAAP10253 952 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CPMP14384 443 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ADRA2CP18825 462 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 IL12BP29460 328 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ARFIP1P53367 373 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 UBASH3AP57075 661 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 LOXL3P58215 753 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PSPHP78330 225 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 MGAT2Q10469 447 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 LAPTM5Q13571 262 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 EXOSC7Q15024 291 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 EFNB3Q15768 340 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PRICKLE4Q2TBC4 344 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 C18orf21Q32NC0 220 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ARL13AQ5H913 290 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PAGE2BQ5JRK9 111 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 TCHHL1Q5QJ38 904 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PDSS1Q5T2R2 415 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 RBM20Q5T481 1227 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 LGSNQ5TDP6 509 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 HBMQ6B0K9 141 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ASPHD2Q6ICH7 369 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 BRICD5Q6PL45 260 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 FAM111BQ6SJ93 734 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 LARP4Q71RC2 724 aaKnown RBP eCLIP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 RNF217Q8TC41 542 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ATG4AQ8WYN0 398 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 C22orf15Q8WYQ4 148 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 DVL3Q92997 716 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 RGMAQ96B86 450 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CMTM7Q96FZ5 175 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PDLIM5Q96HC4 596 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CCDC42Q96M95 316 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 DNAJC7Q99615 494 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 CHP1Q99653 195 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 EGFL8Q99944 293 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 ZNF717Q9BY31 904 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 RACGAP1Q9H0H5 632 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 RASSF4Q9H2L5 321 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PLK3Q9H4B4 646 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 NHEJ1Q9H9Q4 299 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 SDHAF3Q9NRP4 125 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 IARS2Q9NSE4 1012 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 MAT2BQ9NZL9 334 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 SLC17A6Q9P2U8 582 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 PRODH2Q9UF12 536 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 TRAF6Q9Y4K3 522 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 SACSQ9NZJ4 4579 aa6.71□□□□□ -1.34
DEPDC1B-205ENST00000512078 TCRBV7S2A1N4TA0A589 114 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 CLDN34H7C241 214 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 J3QLI3 93 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 RAD51DO75771 328 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 PRB2P02812 416 aaPredicted RBP6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 SERPINB1P30740 379 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 KRT20P35900 424 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 SERPINF1P36955 418 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 EMDP50402 254 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 XKP51811 444 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 RAP1GDS1P52306 607 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 RAC1P63000 192 aa6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 MRPS22P82650 360 aaKnown RBP6.7□□□□□ -1.34
DEPDC1B-205ENST00000512078 COL10A1Q03692 680 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms