RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 C17orf62Q9BQA9 187 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 SLC12A9Q9BXP2 914 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 LSM5Q9Y4Y9 91 aaKnown RBP10.26□□□□□ -0.77
CPNE4-209ENST00000512055 GPR45Q9Y5Y3 372 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 A0A1W2PPK0 400 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 RTCAO00442 366 aaKnown RBP10.26□□□□□ -0.77
CPNE4-209ENST00000512055 SLC22A5O76082 557 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 ARRB2P32121 409 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 KCNC3Q14003 757 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 YIF1BQ5BJH7 314 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 LIPKQ5VXJ0 399 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 LCN8Q6JVE9 175 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 CLEC9AQ6UXN8 241 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 NUP54Q7Z3B4 507 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 TMPRSS9Q7Z410 1059 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 ZNF675Q8TD23 568 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 THEM6Q8WUY1 208 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 BCL7CQ8WUZ0 217 aaPredicted RBP10.26□□□□□ -0.77
CPNE4-209ENST00000512055 TMEM125Q96AQ2 219 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 ATG5Q9H1Y0 275 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 ADAP2Q9NPF8 381 aa10.26□□□□□ -0.77
CPNE4-209ENST00000512055 MRPS33Q9Y291 106 aaKnown RBP10.26□□□□□ -0.77
CPNE4-209ENST00000512055 DNMT3AQ9Y6K1 912 aaPredicted RBP10.26□□□□□ -0.77
CPNE4-209ENST00000512055 LRP5LA4QPB2 252 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 CLDN4O14493 209 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 TO15178 435 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 LATO43561 262 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 TLX3O43711 291 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SCAF4O95104 1147 aaKnown RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 IL3P08700 152 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 HNRNPA1P09651 372 aaKnown RBP eCLIP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 C1GALT1C1LP0DN25 315 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 HMGA1P17096 107 aaKnown RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 CLDN8P56748 225 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 ZC3H14Q6PJT7 736 aaKnown RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RETREG3Q86VR2 466 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 LKAAEAR1Q8TD35 194 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 LRIG1Q96JA1 1093 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 PTCHD1Q96NR3 888 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 FAM173AQ9BQD7 235 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 INPP5KQ9BT40 448 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 FAM118AQ9NWS6 357 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 MRPL22Q9NWU5 206 aaKnown RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 VAPAQ9P0L0 249 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 UTS2RQ9UKP6 389 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 METTL11BQ5VVY1 283 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SLC30A8Q8IWU4 369 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RNF175Q8N4F7 328 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 DTWD1Q8N5C7 304 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SDSLQ96GA7 329 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 GPR78Q96P69 363 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 MRI1Q9BV20 369 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 HINT2Q9BX68 163 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 TUBAL3A6NHL2 446 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 TNFRSF10AO00220 468 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SLC16A5O15375 505 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SCGB2A1O75556 95 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RAB3DO95716 219 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 HOXB2P14652 356 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 FPR1P21462 350 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 ZNF33BQ06732 778 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 KIAA0141Q14154 515 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 STEAP3Q658P3 488 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 VWA5B2Q8N398 1253 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 ARPC5LQ9BPX5 153 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 ARHGAP9Q9BRR9 750 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RNF121Q9H920 327 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 COPS3Q9UNS2 423 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 PCDHB14Q9Y5E9 798 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 A0A1B0GVT2 93 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 GXYLT2A0PJZ3 443 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 F5H5P2 479 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 HCRTR2O43614 444 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 TOX4O94842 621 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RASAL1O95294 804 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SOX14O95416 240 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 F11P03951 625 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 HNRNPA3P51991 378 aaKnown RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RCAN2Q14206 197 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 INAVAQ3KP66 663 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 ZNF776Q68DI1 518 aaPredicted RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 PGAP1Q75T13 922 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 P2RY13Q9BPV8 354 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 RNF32Q9H0A6 362 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 REV1Q9UBZ9 1251 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 PURGQ9UJV8 347 aaKnown RBP10.25□□□□□ -0.77
CPNE4-209ENST00000512055 SHROOM3Q8TF72 1996 aa10.25□□□□□ -0.77
CPNE4-209ENST00000512055 PRICKLE3O43900 615 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 KIAA0513O60268 411 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PABPC4LP0CB38 370 aaKnown RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 LAMP1P11279 417 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CEBPBP17676 345 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PMPCAQ10713 525 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PPA1Q15181 289 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 CBARPQ8N350 705 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 GDPD1Q8N9F7 314 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 PLAC1Q9HBJ0 212 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 SLC2A9Q9NRM0 540 aa10.24□□□□□ -0.77
CPNE4-209ENST00000512055 UBE2J1Q9Y385 318 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-209ENST00000512055 OR1A2Q9Y585 309 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms