RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 TRAV9-2A0A087WT02 112 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 SH3PXD2BA1X283 911 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 RNF212BA8MTL3 300 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 ZNF487B1APH4 448 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 MCF2LO15068 1137 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 KBTBD11O94819 623 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 STBD1O95210 358 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 TRIM16O95361 564 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 FCGR3AP08637 254 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 HOXB8P17481 243 aaPredicted RBP4.29□□□□□ -1.72
LINC01088-208ENST00000511895 CTNNA1P35221 906 aaKnown RBP4.29□□□□□ -1.72
LINC01088-208ENST00000511895 MAGEA9P43362 315 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 SMSP52788 366 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 IST1P53990 364 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 NME5P56597 212 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 GPNMBQ14956 572 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 ABRAXAS1Q6UWZ7 409 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 C11orf53Q8IXP5 236 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 CFAP36Q96G28 342 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 EPSTI1Q96J88 318 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 SERAC1Q96JX3 654 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 DOCK8Q8NF50 2099 aa4.29□□□□□ -1.72
LINC01088-208ENST00000511895 CELSR2Q9HCU4 2923 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 DENND4AQ7Z401 1863 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 LRRD1A4D1F6 860 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 ZNF253O75346 499 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 PIGRP01833 764 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 PCCAP05165 728 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-208ENST00000511895 CT45A8P0DMV1 189 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 CT45A9P0DMV2 189 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 MBL2P11226 248 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-208ENST00000511895 DNAJB1P25685 340 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 HSPA14Q0VDF9 509 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 STX1AQ16623 288 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 SMU1Q2TAY7 513 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 UNC50Q53HI1 259 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 ODF2Q5BJF6 829 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 CT45A2Q5DJT8 189 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 PARP8Q8N3A8 854 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 CHDHQ8NE62 594 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-208ENST00000511895 KLHL30-AS1Q8NEE0 82 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 OR4L1Q8NH43 312 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 FBXO25Q8TCJ0 367 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 MCCC1Q96RQ3 725 aaPredicted RBP4.28□□□□□ -1.72
LINC01088-208ENST00000511895 TRIM4Q9C037 500 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 SLC5A7Q9GZV3 580 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 MAGEF1Q9HAY2 307 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 SLC25A19Q9HC21 320 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 IL1RAPL2Q9NP60 686 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 TECRQ9NZ01 308 aaKnown RBP4.28□□□□□ -1.72
LINC01088-208ENST00000511895 SEC14L4Q9UDX3 406 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 FBXW2Q9UKT8 454 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 PLXNB3Q9ULL4 1909 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 NBASA2RRP1 2371 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 FER1L5A0AVI2 2057 aa4.28□□□□□ -1.72
LINC01088-208ENST00000511895 MCM3APO60318 1980 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 MYH13Q9UKX3 1938 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 MEI4A8MW99 385 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 SRPX2O60687 465 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-208ENST00000511895 RHBDL1O75783 438 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 SNAI1O95863 264 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-208ENST00000511895 PGK2P07205 417 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 TDGF1P13385 188 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 EIF2S2P20042 333 aaKnown RBP4.27□□□□□ -1.73
LINC01088-208ENST00000511895 KLK2P20151 261 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 ADSSP30520 456 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 RDXP35241 583 aaKnown RBP4.27□□□□□ -1.73
LINC01088-208ENST00000511895 HMGCLP35914 325 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 STARD6P59095 220 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 KRT31Q15323 416 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 TIMM50Q3ZCQ8 353 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 MARC1Q5VT66 337 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 TMEM270Q6UE05 265 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 ITIH5Q86UX2 942 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 CCDC170Q8IYT3 715 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 RELL2Q8NC24 303 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-208ENST00000511895 OR6M1Q8NGM8 313 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 TOP1MTQ969P6 601 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 OSBPL8Q9BZF1 889 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 IL1RL2Q9HB29 575 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 ABCC13Q9NSE7 274 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 SLC6A5Q9Y345 797 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 NID2Q14112 1375 aa4.27□□□□□ -1.73
LINC01088-208ENST00000511895 RP1L1Q8IWN7 2480 aaPredicted RBP4.27□□□□□ -1.73
LINC01088-208ENST00000511895 AGRNO00468 2067 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 CRYBG3Q68DQ2 2970 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 ASTN1O14525 1302 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 SCN10AQ9Y5Y9 1956 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 CCDC168Q8NDH2 2452 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 YJEFN3A6XGL0 299 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 K7ERI5 159 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 ASNSP08243 561 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 CCDC159P0C7I6 412 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 FERP16591 822 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 GEMP55040 296 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 NAAAQ02083 359 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 ANKRD55Q3KP44 614 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 MPPE1Q53F39 396 aa4.26□□□□□ -1.73
LINC01088-208ENST00000511895 RTL6Q6ICC9 239 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms