RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SMSP52788 366 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 AQP5P55064 265 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 NUP107P57740 925 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 CRYZQ08257 329 aaKnown RBP12.71□□□□□ -0.37
DDX41-212ENST00000511040 PMPCAQ10713 525 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 DPY19L1Q2PZI1 675 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.37
DDX41-212ENST00000511040 RTL6Q6ICC9 239 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.37
DDX41-212ENST00000511040 VPS37AQ8NEZ2 397 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 OR2M3Q8NG83 312 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 OR9I1Q8NGQ6 314 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 DUSP19Q8WTR2 217 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 SLC35G5Q96KT7 338 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 MAGEB18Q96M61 343 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 TIMP4Q99727 224 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 UGT2B28Q9BY64 529 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 OR2B2Q9GZK3 357 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 DUSP22Q9NRW4 184 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 TAS2R10Q9NYW0 307 aa12.71□□□□□ -0.37
DDX41-212ENST00000511040 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 MED12Q93074 2177 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 FIGNL2A6NMB9 653 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 CYSRT1A8MQ03 144 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 ANGPTL1O95841 491 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 GSNP06396 782 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 PGRP06401 933 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 KRT16P08779 473 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 ATP6V1C1P21283 382 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 UQCRC2P22695 453 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 DPP4P27487 766 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 CHI3L1P36222 383 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 CDKN2CP42773 168 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 GSTA3Q16772 222 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.7□□□□□ -0.38
DDX41-212ENST00000511040 DCST2Q5T1A1 773 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 C1orf185Q5T7R7 199 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 TNFAIP8L2Q6P589 184 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 BHLHB9Q6PI77 547 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 DNAJC14Q6Y2X3 702 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 OLIG3Q7RTU3 272 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 EID3Q8N140 333 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 FADS6Q8N9I5 356 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 OR5M1Q8NGP8 315 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 PHF10Q8WUB8 498 aaKnown RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 ABTB1Q969K4 478 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 SDCCAG3Q96C92 435 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 CCDC115Q96NT0 180 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 SLC35A5Q9BS91 424 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 OR51I1Q9H343 314 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 TCF7L2Q9NQB0 619 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 SDR39U1Q9NRG7 319 aaPredicted RBP12.7□□□□□ -0.38
DDX41-212ENST00000511040 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 CAMK2AQ9UQM7 478 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 FAM215AQ9Y5M1 114 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 DOPEY1Q5JWR5 2465 aa12.7□□□□□ -0.38
DDX41-212ENST00000511040 NCOA6Q14686 2063 aaPredicted RBP12.69□□□□□ -0.38
DDX41-212ENST00000511040 CCDC154A6NI56 674 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 KDM4EB2RXH2 506 aaPredicted RBP12.69□□□□□ -0.38
DDX41-212ENST00000511040 PRSS44E7EML9 344 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 POLR3GO15318 223 aaPredicted RBP12.69□□□□□ -0.38
DDX41-212ENST00000511040 ZIC3O60481 467 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 TGDSO95455 350 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 GLI4P10075 376 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 HK1P19367 917 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 TBXA2RP21731 343 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 GRNP28799 593 aaKnown RBP12.69□□□□□ -0.38
DDX41-212ENST00000511040 SRD5A2P31213 254 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 STARP49675 285 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 SRYQ05066 204 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 VASNQ6EMK4 673 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 TMEM211Q6ICI0 200 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 XKRXQ6PP77 449 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 ZNF621Q6ZSS3 439 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 IFNEQ86WN2 208 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 ULK2Q8IYT8 1036 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 MIER2Q8N344 545 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 OR10Q1Q8NGQ4 319 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 RAB8BQ92930 207 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 SFXN2Q96NB2 322 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 PANX1Q96RD7 426 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 G6PC3Q9BUM1 346 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 UBQLN4Q9NRR5 601 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 ZIM2Q9NZV7 527 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 BTNL2Q9UIR0 455 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 PCNX3Q9H6A9 2034 aa12.69□□□□□ -0.38
DDX41-212ENST00000511040 ALG1L2C9J202 215 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 SCDO00767 359 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 NDUFB5O43674 189 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 WDR1O75083 606 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 OR12D1P0DN82 309 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 HPGDP15428 266 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 GCKP35557 465 aa12.68□□□□□ -0.38
DDX41-212ENST00000511040 ZFP36L2P47974 494 aaKnown RBP12.68□□□□□ -0.38
DDX41-212ENST00000511040 POLR2JP52435 117 aaKnown RBP12.68□□□□□ -0.38
DDX41-212ENST00000511040 DSCR4P56555 118 aaPredicted RBP12.68□□□□□ -0.38
DDX41-212ENST00000511040 C17orf67Q0P5P2 114 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms