RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 AKR1E2Q96JD6 320 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 CCNL2Q96S94 520 aaPredicted RBP3.24□□□□□ -1.89
CAST-229ENST00000510098 LGMNQ99538 433 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 AGPAT1Q99943 283 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 PAPOLGQ9BWT3 736 aaKnown RBP3.24□□□□□ -1.89
CAST-229ENST00000510098 ERVK-6Q9BXR3 956 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 DNTTIP1Q9H147 329 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 TMEM185BQ9H7F4 350 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 KAT8Q9H7Z6 458 aaKnown RBP3.24□□□□□ -1.89
CAST-229ENST00000510098 VIPAS39Q9H9C1 493 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 LPAR2Q9HBW0 351 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 CHRAC1Q9NRG0 131 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 SLC2A8Q9NY64 477 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 PIPOXQ9P0Z9 390 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 PEF1Q9UBV8 284 aaKnown RBP3.24□□□□□ -1.89
CAST-229ENST00000510098 ASIC3Q9UHC3 531 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 RPH3ALQ9UNE2 315 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 DIMT1Q9UNQ2 313 aaKnown RBP3.24□□□□□ -1.89
CAST-229ENST00000510098 WDR45Q9Y484 360 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 MAP3K19Q56UN5 1328 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 UMODL1Q5DID0 1318 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 CENPJQ9HC77 1338 aaPredicted RBP3.24□□□□□ -1.89
CAST-229ENST00000510098 NOTCH3Q9UM47 2321 aa3.24□□□□□ -1.89
CAST-229ENST00000510098 IGKV3D-20A0A0C4DH25 116 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 MEX3AA1L020 520 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 SNTNA6NMZ2 147 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 HSBP1L1C9JCN9 74 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ABCD4O14678 606 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 STX7O15400 261 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 IDH3BO43837 385 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 TPST2O60704 377 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 NEBLO76041 1014 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 YEATS4O95619 227 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 CSTAP01040 98 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 UQCRBP14927 111 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 CPN1P15169 458 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 PRKACAP17612 351 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 TPSB2P20231 275 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 NT5EP21589 574 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ACKR3P25106 362 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 CYLC1P35663 651 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 MATKP42679 507 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 STARP49675 285 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ERVK-16P61578 105 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 RPS15P62841 145 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 CALCOCO2Q13137 446 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 GPR50Q13585 617 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 GCKRQ14397 625 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 MEF2DQ14814 521 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 OR1C1Q15619 314 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 TPSAB1Q15661 275 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 CLPPQ16740 277 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 PARP6Q2NL67 630 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ACSF3Q4G176 576 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 LINC01620Q4KN68 170 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 C2CD6Q53TS8 623 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 LIN9Q5TKA1 542 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 METTL11BQ5VVY1 283 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 LYPLAL1Q5VWZ2 237 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 TMEM64Q6YI46 380 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 EIF3MQ7L2H7 374 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 NLRP9Q7RTR0 991 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 DPY19L4Q7Z388 723 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 LUZP2Q86TE4 346 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 GPBP1Q86WP2 473 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 OR9A1PQ8NGU1 263 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 C11orf45Q8TAV5 145 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 PIGCQ92535 297 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 SLC35C1Q96A29 364 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 EFHD2Q96C19 240 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 SLC25A36Q96CQ1 311 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ZNF689Q96CS4 500 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 TSNARE1Q96NA8 513 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 BPIFA3Q9BQP9 254 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 RAB11FIP5Q9BXF6 653 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 MRPL37Q9BZE1 423 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 TRIM15Q9C019 465 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 GLT8D2Q9H1C3 349 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 POLR3FQ9H1D9 316 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 DHX33Q9H6R0 707 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 ZNF665Q9H7R5 613 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 UBE2TQ9NPD8 197 aaPredicted RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 AGPAT3Q9NRZ7 376 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 UFSP2Q9NUQ7 469 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ZNF319Q9P2F9 582 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 MIOXQ9UGB7 285 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 ZNF346Q9UL40 294 aaKnown RBP3.23□□□□□ -1.89
CAST-229ENST00000510098 SLC9A8Q9Y2E8 581 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 GMEB1Q9Y692 573 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 PRSS21Q9Y6M0 314 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 SPATA31D1Q6ZQQ2 1576 aa3.23□□□□□ -1.89
CAST-229ENST00000510098 LOC100506127A0A0U1RQW1 187 aa3.22□□□□□ -1.89
CAST-229ENST00000510098 OR2AG2A6NM03 316 aa3.22□□□□□ -1.89
CAST-229ENST00000510098 C9JVG2 144 aa3.22□□□□□ -1.89
CAST-229ENST00000510098 LMO7DNF2Z398 122 aa3.22□□□□□ -1.89
CAST-229ENST00000510098 G3V2L1 256 aa3.22□□□□□ -1.89
CAST-229ENST00000510098 K7ERQ8 282 aa3.22□□□□□ -1.89
CAST-229ENST00000510098 FOXE1O00358 373 aaPredicted RBP3.22□□□□□ -1.89
CAST-229ENST00000510098 TRDMT1O14717 391 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms