RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 TMEM44Q2T9K0 475 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 RFTN2Q52LD8 501 aaPredicted RBP11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 EEF1A1P5Q5VTE0 462 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 CHMP1BQ7LBR1 199 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 GALNT10Q86SR1 603 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 GGNQ86UU5 652 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 CNEP1R1Q8N9A8 125 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 CLHC1Q8NHS4 586 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 DUSP19Q8WTR2 217 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 SMPDL3BQ92485 455 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 PPCDCQ96CD2 204 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 APOPT1Q96IL0 206 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 MS4A4EQ96PG1 132 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 PIGQQ9BRB3 760 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 TRMOQ9BU70 441 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 PINK1Q9BXM7 581 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 TBL1XR1Q9BZK7 514 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 REEP4Q9H6H4 257 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 RNF122Q9H9V4 155 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 C3orf14Q9HBI5 128 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 DLL4Q9NR61 685 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 NTMQ9P121 344 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 TESMINQ9Y4I5 508 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 DNAJC15Q9Y5T4 150 aa11.72□□□□□ -0.53
HMGCS1-205ENST00000508319 SHISA8B8ZZ34 492 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ALG1L2C9J202 215 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 AKAP10O43572 662 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 TRIM13O60858 407 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 DIAPH2O60879 1101 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 TNFRSF21O75509 655 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 SMNDC1O75940 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 KCNH1O95259 989 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 OXSR1O95747 527 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 LINC00032P0C843 101 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ACP2P11117 423 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 PRPS2P11908 318 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 GPC1P35052 558 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 KIR2DL2P43627 348 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 CLK3P49761 638 aaKnown RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 PPP2R2AP63151 447 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 FAM27E3Q08E93 113 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 KEAP1Q14145 624 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 GUSBP1Q15486 140 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 DEFB113Q30KQ7 82 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 MFSD12Q6NUT3 480 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF474Q6S9Z5 364 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 CAMKMTQ7Z624 323 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 BTLAQ7Z6A9 289 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ZAR1Q86SH2 424 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 EXOC3L1Q86VI1 746 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 METTL25Q8N6Q8 603 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 BANPQ8N9N5 519 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 CDRT4Q8N9R6 151 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ZFP28Q8NHY6 868 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 FBXO30Q8TB52 745 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 FNDC9Q8TBE3 224 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 GPR151Q8TDV0 419 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ZBED6CLQ96FA7 236 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF845Q96IR2 970 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 L2HGDHQ9H9P8 463 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ACSS1Q9NUB1 689 aaPredicted RBP11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 TMED5Q9Y3A6 229 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ZNF175Q9Y473 711 aa11.71□□□□□ -0.53
HMGCS1-205ENST00000508319 ROS1P08922 2347 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 SIAH2O43255 324 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 GMFGO60234 142 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 KCNK2O95069 426 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 CHEK2O96017 543 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 CGAP01215 116 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 NGFRP08138 427 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 BCKDHAP12694 445 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 CD79BP40259 229 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 EEFSECP57772 596 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 SIRPAP78324 504 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 ADAM8P78325 824 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 OCRLQ01968 901 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 C17orf67Q0P5P2 114 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 PON3Q15166 354 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 DUSP5Q16690 384 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 UGT3A2Q3SY77 523 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 GALNTL6Q49A17 601 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 GLYR1Q49A26 553 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 VPS26BQ4G0F5 336 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 EXOSC6Q5RKV6 272 aaKnown RBP11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 SZRD1Q7Z422 152 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 TRABD2AQ86V40 505 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 SLC16A11Q8NCK7 471 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 NUP43Q8NFH3 380 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 OR4C3Q8NH37 302 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 OR2W6PQ8NHA6 318 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 CEP70Q8NHQ1 597 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 TWIST2Q8WVJ9 160 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 SLC9A6Q92581 669 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 PGM2Q96G03 612 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 MECRQ9BV79 373 aa11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 OPN3Q9H1Y3 402 aaPredicted RBP11.7□□□□□ -0.54
HMGCS1-205ENST00000508319 SH3BP4Q9P0V3 963 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms