RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 BEX3Q00994 111 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZP4Q12836 540 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF177Q13360 481 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 KIAA0141Q14154 515 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 TFDP1Q14186 410 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 MESDQ14696 234 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 UBE2V2Q15819 145 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 CDKN3Q16667 212 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM74A3Q4VXF1 159 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 C10orf120Q5SQS8 335 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZSCAN25Q6NSZ9 544 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 PNCKQ6P2M8 343 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 APOOLQ6UXV4 268 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZYG11AQ6WRX3 759 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 TMEM17Q86X19 198 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 KRTAP11-1Q8IUC1 163 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC22A9Q8IVM8 553 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF683Q8IZ20 524 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 SAMD12Q8N8I0 201 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 NECAB1Q8N987 351 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 SYT14Q8NB59 555 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 NFAM1Q8NET5 270 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR4F17Q8NGA8 305 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR5AU1Q8NGC0 362 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR4F5Q8NH21 305 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 CNRIP1Q96F85 164 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR4F4Q96R69 305 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 CHCHD5Q9BSY4 110 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 TMEM43Q9BTV4 400 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 STRADBQ9C0K7 418 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 TUBB1Q9H4B7 451 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 NT5DC2Q9H857 520 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 Q9HAA7 133 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 APMAPQ9HDC9 416 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ETNK2Q9NVF9 386 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 CTSZQ9UBR2 303 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 EMCNQ9ULC0 261 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 KANK1Q14678 1352 aa3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF646O15015 1829 aaPredicted RBP3.33□□□□□ -1.88
TRAPPC13-209ENST00000508304 ABCA7Q8IZY2 2146 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 IGHV4-30-2A0A087WSY4 118 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 HELTA6NFD8 242 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZSCAN5BA6NJL1 495 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 RNF212BA8MTL3 300 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 C11orf98E9PRG8 122 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 NPIPB9F8W1W9 429 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 IMPA2O14732 288 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 ARPC3O15145 178 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 GPRIN2O60269 458 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 ERLIN1O75477 346 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 LRATO95237 230 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 NUDT14O95848 222 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 CHRNA1P02708 482 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 EMDP50402 254 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 CRYBA2P53672 197 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 PLA2G16P53816 162 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 MLF2Q15773 248 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 SSX2Q16385 188 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 KNOP1Q1ED39 458 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 C15orf32Q32M92 178 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 UNC50Q53HI1 259 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 PHYHD1Q5SRE7 291 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 RHBDD2Q6NTF9 364 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 RUFY3Q7L099 469 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC25A42Q86VD7 318 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 SLC38A6Q8IZM9 456 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 OR10G7Q8NGN6 311 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 C11orf45Q8TAV5 145 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 SPPL2AQ8TCT8 520 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 MAIP1Q8WWC4 291 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 DLX4Q92988 240 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 CAPNS2Q96L46 248 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM218AQ96MZ4 157 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 TESK2Q96S53 571 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 RIT2Q99578 217 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 NPAS2Q99743 824 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 GPR174Q9BXC1 333 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM192AQ9GZU8 254 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 RHOJQ9H4E5 214 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 ABCB10Q9NRK6 738 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 AIPL1Q9NZN9 384 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 GNG12Q9UBI6 72 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 SEC14L3Q9UDX4 400 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 PURGQ9UJV8 347 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 CDH9Q9ULB4 789 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 NIP7Q9Y221 180 aaKnown RBP eCLIP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 TMED5Q9Y3A6 229 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 MRPS18CQ9Y3D5 142 aaKnown RBP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 AUP1Q9Y679 476 aa3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 COL4A4P53420 1690 aaPredicted RBP3.32□□□□□ -1.88
TRAPPC13-209ENST00000508304 GRIN2DO15399 1336 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 A0A0A6YYD4 124 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 FAM240BA0A1B0GVZ2 78 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 E9PBE3 544 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 STX7O15400 261 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZSCAN12O43309 604 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 ZNF749O43361 778 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 LCMT2O60294 686 aaKnown RBP3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 KLHL41O60662 606 aa3.31□□□□□ -1.88
TRAPPC13-209ENST00000508304 NEBLO76041 1014 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms