RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 SLC22A2O15244 555 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CLOCKO15516 846 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 RS1O15537 224 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MSI1O43347 362 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 PRAF2O60831 178 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LRP3O75074 770 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 PSIP1O75475 530 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 NDUFB4O95168 129 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 F10P00742 488 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CST4P01036 141 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 IGHV2-70P01814 119 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 RAF1P04049 648 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LCKP06239 509 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GPIP06744 558 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 DCNP07585 359 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MMP3P08254 477 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 STSP08842 583 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GSTT2P0CG29 244 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GSTT2BP0CG30 244 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 UBCP0CG48 685 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TRIM49P0CI25 452 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TRIM49CP0CI26 452 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC35E2BP0CK96 405 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SLC35E2P0CK97 266 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CT45A8P0DMV1 189 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CT45A9P0DMV2 189 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 T-ENOLP0DO92 83 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 HSPD1P10809 573 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CEACAM1P13688 526 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ETS2P15036 469 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 M6PRP20645 277 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ARRB2P32121 409 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GTF2H1P32780 548 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 IFNA8P32881 189 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CDH5P33151 784 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 OR1D2P34982 312 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ARR3P36575 388 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 RPL13AP40429 203 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MAGEA3P43357 314 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CSNK1DP48730 415 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MRPL19P49406 292 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CDK9P50750 372 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 DUSP3P51452 185 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 NDST2P52849 883 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LIMK2P53671 638 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ATP6V0D1P61421 351 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ADORA2A-AS1P86434 159 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GRIK3Q13003 919 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 PEX6Q13608 980 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 EXOSC2Q13868 293 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GRB7Q14451 532 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ELAVL3Q14576 367 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 EMC2Q15006 297 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ALKBH6Q3KRA9 238 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ACCSLQ4AC99 568 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CT45A2Q5DJT8 189 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 KIAA1755Q5JYT7 1200 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 C9orf135Q5VTT2 229 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF691Q5VV52 312 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GPR107Q5VW38 600 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SUSD4Q5VX71 490 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LPCAT4Q643R3 524 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 STUMQ69YW2 141 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 RTL6Q6ICC9 239 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LRRC8EQ6NSJ5 796 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 C3orf33Q6P1S2 294 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM220Q6QAJ8 160 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 BTNL8Q6UX41 500 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF793Q6ZN11 406 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 QSOX2Q6ZRP7 698 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMPRSS11FQ6ZWK6 438 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MOB2Q70IA6 237 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SSX6Q7RTT6 188 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LHFPL4Q7Z7J7 247 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SERPINA9Q86WD7 417 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF677Q86XU0 584 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ERI1Q8IV48 349 aaKnown RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MAP7D3Q8IWC1 876 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SPAG16Q8N0X2 631 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 CADM3Q8N126 398 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 PRSS35Q8N3Z0 413 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 JAGN1Q8N5M9 183 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 C12orf76Q8N812 135 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM99Q8N816 258 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ATP6V1C2Q8NEY4 427 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MPLKIPQ8TAP9 179 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 MRAPQ8TCY5 172 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 SSMEM1Q8WWF3 244 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 IGFBPL1Q8WX77 278 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TMEM37Q8WXS4 190 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ST8SIA1Q92185 356 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TOP1MTQ969P6 601 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 ZNF707Q96C28 371 aaPredicted RBP3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 C10orf35Q96D05 121 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 LGALS12Q96DT0 336 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 GPR78Q96P69 363 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 OPALINQ96PE5 141 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 TAAR1Q96RJ0 339 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 OLFM1Q99784 485 aa3.28□□□□□ -1.88
HMGB3P15-201ENST00000507326 FUNDC2Q9BWH2 189 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms