RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 KCNJ5P48544 419 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 DNAJB13P59910 316 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 RPS3AP61247 264 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 PRR5P85299 388 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 C17orf67Q0P5P2 114 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 FGFBP1Q14512 234 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 KIAA0040Q15053 153 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 TMEM44Q2T9K0 475 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CCDC153Q494R4 210 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 GLYR1Q49A26 553 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF385BQ569K4 471 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SHEQ5VZ18 495 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CLEC6AQ6EIG7 209 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 PPP4R4Q6NUP7 873 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 APOOLQ6UXV4 268 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SH2D5Q6ZV89 423 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 GALNT10Q86SR1 603 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 BIVMQ86UB2 503 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 GGNQ86UU5 652 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 EXOC3L1Q86VI1 746 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CNPY4Q8N129 248 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 METTL25Q8N6Q8 603 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF610Q8N9Z0 462 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 CCDC63Q8NA47 563 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 ZFP28Q8NHY6 868 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 KIF18AQ8NI77 898 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 FBXO30Q8TB52 745 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 GPR151Q8TDV0 419 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 TRIM44Q96DX7 344 aaPredicted RBP10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 ZC3HAV1LQ96H79 300 aaKnown RBP10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SLC39A3Q9BRY0 314 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 UBTD1Q9HAC8 227 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 LRTM1Q9HBL6 345 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 C1orf109Q9NX04 203 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF226Q9NYT6 803 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 PROCRQ9UNN8 238 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 VDAC3Q9Y277 283 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 FIS1Q9Y3D6 152 aa10.38□□□□□ -0.75
HMGCS1-204ENST00000507293 SMIM23A6NLE4 172 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 TTC36A6NLP5 189 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 NPIPB8E9PQR5 432 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 C16orf97H3BN30 126 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 KIF2AO00139 706 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 EIF1AYO14602 144 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 RGS14O43566 566 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 AKAP10O43572 662 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 AQP8O94778 261 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 NKX2-2O95096 273 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 INHBBP09529 407 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 CD8BP10966 210 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 ACP2P11117 423 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 FCGR2AP12318 317 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 SDC1P18827 310 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 ADSLP30566 484 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 MAP3K8P41279 467 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 PRKAG1P54619 331 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 RPL38P63173 70 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 LTBQ06643 244 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 GUSBP1Q15486 140 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 SGCBQ16585 318 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 Q5PR19 223 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 LIPMQ5VYY2 423 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 Q71RC1 249 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 SZRD1Q7Z422 152 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 GATSQ8NAP1 163 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 OR2T11Q8NH01 316 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 SLC9A6Q92581 669 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 HOXB13Q92826 284 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 PPCDCQ96CD2 204 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF764Q96H86 408 aaPredicted RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 METTL2AQ96IZ6 378 aaKnown RBP10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 TSSK3Q96PN8 268 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 HS3ST6Q96QI5 342 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 CCT7Q99832 543 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 OXSMQ9NWU1 459 aa10.37□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF469Q96JG9 3925 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 NAV3Q8IVL0 2385 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 COPEO14579 308 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 AZIN1O14977 448 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ARHGEF9O43307 516 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 NDUFB5O43674 189 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 SMPD2O60906 423 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 OXSR1O95747 527 aaPredicted RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ZNF17P17021 662 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CRHR1P34998 444 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 SLC6A8P48029 635 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 CCT5P48643 541 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 OCRLQ01968 901 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ACKR1Q16570 336 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 EXOC3L2Q2M3D2 409 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 VPS26BQ4G0F5 336 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ANKRD34AQ69YU3 496 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 FIGNL1Q6PIW4 674 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 Q6ZSR9 355 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 FAM214BQ7L5A3 538 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 ZAR1Q86SH2 424 aa10.36□□□□□ -0.75
HMGCS1-204ENST00000507293 P3H2Q8IVL5 708 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms