RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 ISYNA1Q9NPH2 558 aa7.12□□□□□ -1.27
PPARGC1A-204ENST00000506055 PLSCR3Q9NRY6 295 aa7.12□□□□□ -1.27
PPARGC1A-204ENST00000506055 NLGN3Q9NZ94 848 aa7.12□□□□□ -1.27
PPARGC1A-204ENST00000506055 CBLCQ9ULV8 474 aa7.12□□□□□ -1.27
PPARGC1A-204ENST00000506055 ZNF232Q9UNY5 417 aa7.12□□□□□ -1.27
PPARGC1A-204ENST00000506055 WDR45Q9Y484 360 aa7.12□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3DA0A087WVF3 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3IA0A087WXS9 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3EA0A087X179 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3KA0A087X1G2 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 A0A0B4J293 547 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CENPVL1A0A0U1RR11 272 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 FAM172BPA6NC97 362 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3FA6NER0 549 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 DUXAA6NLW8 204 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3LB9A6J9 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 RGS13O14921 159 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 AKAP8O43823 692 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 DNAJB6O75190 326 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 EML2O95834 649 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3HP0C7X1 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 GKN3PP0CG01 181 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 NDUFV2P19404 249 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 C5AR1P21730 350 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PRKAR1BP31321 381 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 RPS5P46782 204 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 GCGRP47871 477 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PPP3R1P63098 170 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 RPS21P63220 83 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SIM1P81133 766 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ID2Q02363 134 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PGGHGQ32M88 737 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 DEFB134Q4QY38 66 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PPP2R2DQ66LE6 453 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3GQ6DHY5 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3CQ6IPX1 549 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CD200R1LQ6Q8B3 271 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 FRRS1Q6ZNA5 592 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ZNF620Q6ZNG0 422 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 AMIGO1Q86WK6 493 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PEX5LQ8IYB4 626 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D3Q8IZP1 549 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 RDH10Q8IZV5 341 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 LRRC25Q8N386 305 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SIRT6Q8N6T7 355 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ARIH2OSQ8N7S6 290 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 DTX3Q8N9I9 347 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ASCC1Q8N9N2 400 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 MFSD9Q8NBP5 474 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ZCCHC10Q8TBK6 192 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 RNF31Q96EP0 1072 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SNX18Q96RF0 628 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TMEM246Q9BRR3 403 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 YIPF2Q9BWQ6 316 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 DPH1Q9BZG8 443 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 MKRN2Q9H000 416 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TRIM45Q9H8W5 580 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CACYBPQ9HB71 228 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TNFRSF10DQ9UBN6 386 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TBC1D29Q9UFV1 150 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ZNF443Q9Y2A4 671 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SLC17A4Q9Y2C5 497 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CLCA3PQ9Y6N3 262 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 MUC22E2RYF6 1773 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 GSAPA4D1B5 854 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 FAM25AB3EWG3 89 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 FAM25CB3EWG5 89 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 FAM25GB3EWG6 89 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CHST10O43529 356 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 HRO43593 1189 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ADH1BP00325 375 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PRG2P13727 222 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CPN2P22792 545 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 AK4P27144 223 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 HTR1FP30939 366 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 EVX1P49640 407 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SLC16A1P53985 500 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CTBP2P56545 445 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CDK10Q15131 360 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 QPRTQ15274 297 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 KLHL12Q53G59 568 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TRMT12Q53H54 448 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 MFSD12Q6NUT3 480 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PLET1Q6UQ28 207 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 CXXC5Q7LFL8 322 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 YAF2Q8IY57 180 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 TMEFF1Q8IYR6 380 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SHISA5Q8N114 240 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SLC7A6Q92536 515 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 NR4A3Q92570 626 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 SENP5Q96HI0 755 aaPredicted RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 APOOQ9BUR5 198 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PLA2G2FQ9BZM2 168 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ENKD1Q9H0I2 346 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 UBQLN3Q9H347 655 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 ANKRD19PQ9H560 264 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 B3GAT2Q9NPZ5 323 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 HINT3Q9NQE9 182 aaKnown RBP7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 PTGFRNQ9P2B2 879 aa7.11□□□□□ -1.27
PPARGC1A-204ENST00000506055 NLKQ9UBE8 527 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms