RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-255	ENST00000504927	ITCH	Q96J02	903 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	PSMG3-AS1	Q96PY0	264 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	PHF12	Q96QT6	1004 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	SLC6A15	Q9H2J7	730 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	CCDC134	Q9H6E4	229 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	PTGES2	Q9H7Z7	377 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	NPHS2	Q9NP85	383 aa		18.83	■□□□□ 0.6
DDR1-255	ENST00000504927	FIGNL2	A6NMB9	653 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	SCD	O00767	359 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	NDUFB5	O43674	189 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	ANGPTL1	O95841	491 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	TROVE2	P10155	538 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	SRD5A2	P31213	254 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	MAGEA8	P43361	318 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	ANXA11	P50995	505 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	DSCR4	P56555	118 aa	Predicted RBP	18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	CCNJ	Q5T5M9	372 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	ATAD3B	Q5T9A4	648 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	METTL21C	Q5VZV1	264 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	TMEM211	Q6ICI0	200 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	OR5M10	Q6IEU7	315 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	RPTN	Q6XPR3	784 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	MISP	Q8IVT2	679 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	FADS6	Q8N9I5	356 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	ZNF527	Q8NB42	609 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	CHDH	Q8NE62	594 aa	Predicted RBP	18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	OR4K17	Q8NGC6	315 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	OR5D16	Q8NGK9	328 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	OR9I1	Q8NGQ6	314 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	PHF10	Q8WUB8	498 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	INPP5K	Q9BT40	448 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	OR2B2	Q9GZK3	357 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	OR51I1	Q9H343	314 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	FBXO34	Q9NWN3	711 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	DCTN4	Q9UJW0	460 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	FBXL2	Q9UKC9	423 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	KCNE3	Q9Y6H6	103 aa		18.82	■□□□□ 0.6
DDR1-255	ENST00000504927	NUP214	P35658	2090 aa	Predicted RBP	18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	IGLV3-32	A0A0A0MS00	114 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	C15orf38-AP3S2	A0A0A6YYH1	394 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927		A0A1W2PQD3	144 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	WDR1	O75083	606 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	KRT75	O95678	551 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	OXSR1	O95747	527 aa	Predicted RBP	18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	ACTL6A	O96019	429 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	GUSB	P08236	651 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	ZCCHC18	P0CG32	403 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	GABRA1	P14867	456 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	ENDOU	P21128	410 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	MSX1	P28360	303 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	RPS26	P62854	115 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	GUCY1A3	Q02108	690 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	SQLE	Q14534	574 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	GANAB	Q14697	944 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	ARHGAP11B	Q3KRB8	267 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	EIPR1	Q53HC9	387 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	EMC4	Q5J8M3	183 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	BLOC1S3	Q6QNY0	202 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	APOOL	Q6UXV4	268 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	GALNT10	Q86SR1	603 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	OR14L1P	Q8NHC6	308 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	RFWD2	Q8NHY2	731 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	THOC1	Q96FV9	657 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	CCDC120	Q96HB5	630 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	SDF2	Q99470	211 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	DSN1	Q9H410	356 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	TAS2R10	Q9NYW0	307 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	SPRR3	Q9UBC9	169 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	ICE1	Q9Y2F5	2266 aa		18.81	■□□□□ 0.6
DDR1-255	ENST00000504927	GTF3C1	Q12789	2109 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927		A0A0G2JND7	137 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	ADAM10	O14672	748 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	STX11	O75558	287 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	ANP32D	O95626	131 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	VIM	P08670	466 aa	Known RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	NCF2	P19878	526 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	DPP4	P27487	766 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	PTGER4	P35408	488 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	MDH1	P40925	334 aa	Known RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	KHK	P50053	298 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	SMS	P52788	366 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	RCAN2	Q14206	197 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	SF3B4	Q15427	424 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	WIPI1	Q5MNZ9	446 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	AP1AR	Q63HQ0	302 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	VASN	Q6EMK4	673 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	MTERF4	Q7Z6M4	381 aa	Known RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	ZAR1	Q86SH2	424 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	YRDC	Q86U90	279 aa	Known RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	PM20D2	Q8IYS1	436 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	OR2M3	Q8NG83	312 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	OR5M9	Q8NGP3	310 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	XAGE5	Q8WWM1	108 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	ABTB1	Q969K4	478 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	VPS33A	Q96AX1	596 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	DMRTA2	Q96SC8	542 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	TIMP4	Q99727	224 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	RTN4R	Q9BZR6	473 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	SERHL2	Q9H4I8	314 aa		18.8	■□□□□ 0.6
DDR1-255	ENST00000504927	PNPLA3	Q9NST1	481 aa		18.8	■□□□□ 0.6

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