RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 THEM5Q8N1Q8 247 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-203ENST00000503274 BANPQ8N9N5 519 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 CSNK1G2-AS1Q8NCQ2 148 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 FIBINQ8TAL6 211 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 PCNPQ8WW12 178 aaKnown RBP4.54□□□□□ -1.68
NIPBL-203ENST00000503274 ING5Q8WYH8 240 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 SMARCD2Q92925 531 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 C18orf25Q96B23 403 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-203ENST00000503274 MSANTD3Q96H12 275 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 ERGIC2Q96RQ1 377 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 ASB7Q9H672 318 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 RARRES3Q9UL19 164 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 RAB23Q9ULC3 237 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 EXOC7Q9UPT5 735 aa4.54□□□□□ -1.68
NIPBL-203ENST00000503274 A0A0U1RQK1 487 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 TTC26A0AVF1 554 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF320A2RRD8 509 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 VPS37CA5D8V6 355 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 TTI1O43156 1089 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SYT7O43581 403 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 OR6B1O95007 311 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 PIGRP01833 764 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 GAP43P17677 238 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 PSMC3P17980 439 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 GDI1P31150 447 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 TNNT3P45378 269 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 RPS9P46781 194 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 FHITP49789 147 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 KHKP50053 298 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 ZNF131P52739 623 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SNU13P55769 128 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 RPS27AP62979 156 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 GTF2BQ00403 316 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 CSTF1Q05048 431 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 TWF1Q12792 350 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 FASTKQ14296 549 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 ZBTB6Q15916 424 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SLC25A30Q5SVS4 291 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 AGAP7PQ5VUJ5 663 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 CD300LGQ6UXG3 332 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 CCDC73Q6ZRK6 1079 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 TMUB2Q71RG4 321 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 MFSD6LQ8IWD5 586 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SPEM1Q8N4L4 309 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 OR1B1Q8NGR6 318 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SPATA18Q8TC71 538 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 GANCQ8TET4 914 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 C2orf15Q8WU43 125 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 CLDN23Q96B33 292 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 AP2M1Q96CW1 435 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 ANKRD27Q96NW4 1050 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 PANX3Q96QZ0 392 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 RBM24Q9BX46 236 aaKnown RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 ACPTQ9BZG2 426 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 CXCL16Q9H2A7 254 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 C8orf33Q9H7E9 229 aaPredicted RBP4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SP140LQ9H930 580 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 TRPV5Q9NQA5 729 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 SLC7A10Q9NS82 523 aa4.53□□□□□ -1.68
NIPBL-203ENST00000503274 NCOR2Q9Y618 2525 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 DCHS1Q96JQ0 3298 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 VWA8A3KMH1 1905 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 EPG5Q9HCE0 2579 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CNOT1A5YKK6 2376 aaKnown RBP4.52□□□□□ -1.69
NIPBL-203ENST00000503274 LOC390937A0A1W2PQ73 354 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 OR5H15A6NDH6 313 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 RPL37AP8A6NKH3 93 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CYB561D2O14569 222 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CCSO14618 274 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CHADO15335 359 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 BCL2L11O43521 198 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 HPP00738 406 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 IGHG1P01857 330 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 GSK3BP49841 420 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CCR4P51679 360 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 SPAG1Q07617 926 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 KARSQ15046 597 aaKnown RBP4.52□□□□□ -1.69
NIPBL-203ENST00000503274 C15orf32Q32M92 178 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 FAM78AQ5JUQ0 283 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CENPPQ6IPU0 288 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 ASPGQ86U10 573 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 SPAG16Q8N0X2 631 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CLEC1AQ8NC01 280 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 SPPL2BQ8TCT7 592 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 FAM3CQ92520 227 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 GGHQ92820 318 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 PSMG2Q969U7 264 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 ULK4Q96C45 1275 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 TCEAL4Q96EI5 215 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 SENP8Q96LD8 212 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 C1orf147Q96MC9 270 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-203ENST00000503274 ZNF560Q96MR9 790 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 RCHY1Q96PM5 261 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 ACCSQ96QU6 501 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 CCSER1Q9C0I3 900 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 ZSCAN16Q9H4T2 348 aaPredicted RBP4.52□□□□□ -1.69
NIPBL-203ENST00000503274 HEBP1Q9NRV9 189 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 PLEK2Q9NYT0 353 aa4.52□□□□□ -1.69
NIPBL-203ENST00000503274 TUBGCP4Q9UGJ1 667 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms