RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 PALB2Q86YC2 1186 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 TMEM139Q8IV31 216 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 MAP7D3Q8IWC1 876 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZC3H3Q8IXZ2 948 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 SPEM1Q8N4L4 309 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 FNDC5Q8NAU1 212 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 SYT14Q8NB59 555 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 NOA1Q8NC60 698 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 LINC00301Q8NCQ3 95 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ADAD2Q8NCV1 583 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 SDR9C7Q8NEX9 313 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR4A15Q8NGL6 344 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 OR14A16Q8NHC5 309 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 WDR36Q8NI36 951 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 CD99L2Q8TCZ2 262 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 HCAR2Q8TDS4 363 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ASB5Q8WWX0 329 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 IRGQQ8WZA9 623 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ELMO1Q92556 727 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 LHX4Q969G2 390 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 DYNLL2Q96FJ2 89 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 TMEM19Q96HH6 336 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 PPP1R16AQ96I34 528 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZFYVE19Q96K21 471 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 MTMR9Q96QG7 549 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 C20orf24Q9BUV8 137 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF747Q9BV97 191 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 TSSK1BQ9BXA7 367 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 NUSAP1Q9BXS6 441 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 POLDIP3Q9BY77 421 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 VN1R1Q9GZP7 353 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 MTIF3Q9H2K0 278 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 GAL3ST2Q9H3Q3 398 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 TLE6Q9H808 572 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 CLK4Q9HAZ1 481 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 RNF146Q9NTX7 359 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 RMND1Q9NWS8 449 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 NYAP2Q9P242 653 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC7A8Q9UHI5 535 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF490Q9ULM2 529 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 DIMT1Q9UNQ2 313 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 SATB2Q9UPW6 733 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 GSTK1Q9Y2Q3 226 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 SRPRBQ9Y5M8 271 aaKnown RBP3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 NAV1Q8NEY1 1877 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 MYH1P12882 1939 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 TRIOBPQ9H2D6 2365 aa3.89□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF236Q9UL36 1845 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 MTMR11A4FU01 709 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SMCO2A6NFE2 343 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 YJEFN3A6XGL0 299 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 TMCO5BA8MYB1 307 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF732B4DXR9 585 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 H3BMH7 237 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 DLGAP1O14490 977 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 DVL1O14640 695 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 BCKDKO14874 412 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SCAMP2O15127 329 aaKnown RBP3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CHMP2AO43633 222 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 NDUFA7O95182 113 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 PAPSS2O95340 614 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 H6PDO95479 791 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 EML2O95834 649 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CLPTM1O96005 669 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 MMP1P03956 469 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 VTNP04004 478 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 ERCC1P07992 297 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 GSTA2P09210 222 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CT45A8P0DMV1 189 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CT45A9P0DMV2 189 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SNHG28P0DPA3 235 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 PRKAR1AP10644 381 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 MCF2P10911 925 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CCNB1P14635 433 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 ETS2P15036 469 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 ANPEPP15144 967 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 MSH3P20585 1137 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CBLP22681 906 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 MSNP26038 577 aaKnown RBP3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CD80P33681 288 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 RORAP35398 523 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC1A4P43007 532 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 BLVRAP53004 296 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 TNNC1P63316 161 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SIGLEC14Q08ET2 396 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 KRT81Q14533 505 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 NCF4Q15080 339 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 CT45A2Q5DJT8 189 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 C6orf226Q5I0X4 101 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 EARS2Q5JPH6 523 aaKnown RBP3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 NDUFAF5Q5TEU4 345 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 FAM69BQ5VUD6 431 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 LYPLAL1Q5VWZ2 237 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC22A10Q63ZE4 541 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 DOK6Q6PKX4 331 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF852Q6ZMS4 543 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 ZNF600Q6ZNG1 722 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 STOX1Q6ZVD7 989 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 FAM57BQ71RH2 274 aa3.88□□□□□ -1.79
HMGB1P21-201ENST00000502313 SLC24A5Q71RS6 500 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms