RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 BARX1Q9HBU1 254 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 FAM60AQ9NP50 221 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 FARSBQ9NSD9 589 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 IRAK4Q9NWZ3 460 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 KLHL28Q9NXS3 571 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 AHSPQ9NZD4 102 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 TEKT2Q9UIF3 430 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 NXT1Q9UKK6 140 aaKnown RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 SLC12A4Q9UP95 1085 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 LIPT1Q9Y234 373 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 DNAJC15Q9Y5T4 150 aa4.68□□□□□ -1.66
FXN-205ENST00000498653 MAGED1Q9Y5V3 778 aaPredicted RBP4.68□□□□□ -1.66
FXN-205ENST00000498653 MAGEB17A8MXT2 336 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SDHDO14521 159 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SHOXO15266 292 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 P2RX6O15547 441 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 NDUFS4O43181 175 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 PEX11AO75192 247 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SH3BGRLO75368 114 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SEC22BO75396 215 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 OR2B3O76000 313 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 RSL1D1O76021 490 aaKnown RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 MYO1DO94832 1006 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SERPINA6P08185 405 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 DANCRP0C864 163 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ALOX15P16050 662 aaPredicted RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 CCKARP32238 428 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 AQP5P55064 265 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 HMGCS1Q01581 520 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 CHRNEQ04844 493 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SF3A3Q12874 501 aaKnown RBP eCLIP4.67□□□□□ -1.66
FXN-205ENST00000498653 CUL3Q13618 768 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 GRM7Q14831 915 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 NDUFA9Q16795 377 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 PRTGQ2VWP7 1150 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 FAM214AQ32MH5 1076 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TMEM35AQ53FP2 167 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 DMRTC1Q5HYR2 192 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SPDYAQ5MJ70 313 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 WASHC2DQ5SRD0 308 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 DEPDC1Q5TB30 811 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 YOD1Q5VVQ6 348 aaPredicted RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 KHDRBS2Q5VWX1 349 aaKnown RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 FAM219BQ5XKK7 198 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 NXNQ6DKJ4 435 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ASPHD2Q6ICH7 369 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TLDC1Q6P9B6 456 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 EPGNQ6UW88 154 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 RINLQ6ZS11 566 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SPATA21Q7Z572 469 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 VN1R4Q7Z5H5 301 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 WFDC3Q8IUB2 231 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 RNF175Q8N4F7 328 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ZNF441Q8N8Z8 693 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SRFBP1Q8NEF9 429 aaKnown RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 RFWD2Q8NHY2 731 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 STT3BQ8TCJ2 826 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TAF15Q92804 592 aaKnown RBP eCLIP4.67□□□□□ -1.66
FXN-205ENST00000498653 PPP1R14AQ96A00 147 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 RGMAQ96B86 450 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TUBGCP3Q96CW5 907 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 NTNG2Q96CW9 530 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TM4SF19Q96DZ7 209 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 PPP1R36Q96LQ0 422 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 IMMP1LQ96LU5 166 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 PPP3R2Q96LZ3 170 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 HS6ST2Q96MM7 605 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 RILPQ96NA2 401 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ZNF285Q96NJ3 590 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 F2RL3Q96RI0 385 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 HBEGFQ99075 208 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ELAC2Q9BQ52 826 aaKnown RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 MACROD1Q9BQ69 325 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 SIKE1Q9BRV8 207 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 CCDC28BQ9BUN5 200 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 MS4A8Q9BY19 250 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 NUF2Q9BZD4 464 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ACPTQ9BZG2 426 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ROGDIQ9GZN7 287 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 OR51B5Q9H339 312 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TUBB1Q9H4B7 451 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 ZDHHC11Q9H8X9 412 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 MEAF6Q9HAF1 191 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 MBNL3Q9NUK0 354 aaKnown RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 TXLNGQ9NUQ3 528 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 C1orf109Q9NX04 203 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 KLHL14Q9P2G3 628 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 VPS29Q9UBQ0 182 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 NDRG3Q9UGV2 375 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 TMEFF2Q9UIK5 374 aaPredicted RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 SNRNP200O75643 2136 aaKnown RBP4.67□□□□□ -1.66
FXN-205ENST00000498653 HMCN2Q8NDA2 5059 aa4.67□□□□□ -1.66
FXN-205ENST00000498653 MUC2Q02817 5179 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 A0A088AWK7 358 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 A0A0G2JND7 137 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 GOLGA8QA0A0J9YX86 632 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 A0A1B0GVC2 190 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 ATP6AP2A0A1C7CYW4 349 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 FITM1A5D6W6 292 aa4.66□□□□□ -1.66
FXN-205ENST00000498653 GOLGA8OA6NCC3 632 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms